Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1531 |
Symbol | |
ID | 6177722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1697349 |
End bp | 1698653 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681292 |
Product | major facilitator superfamily metabolite/H(+) symporter |
Protein accession | YP_001808234 |
Protein GI | 172060582 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCC AGACCGACCA AGCTGCGCTG TCCGCGCATG ACACCCGGCG GCGCGTGTTC GCCATCGTCG GCGCCTCATC GGGCAACCTC GTCGAGTGGT TCGACTTCTA TATCTACTCG TTCTGCGCGC TGTACTTCGC GCCGGCGTTC TTCCCGAGCG GCAACTCCAC GACGCAGCTG CTGAACACGG CCGGCGTGTT CGCGGCCGGC TTCCTGATGC GTCCGATCGG AGGCTGGCTG TTCGGCCGCA TCGCCGATCG TCACGGCCGC CGCGCGGCGA TGATGATCTC GGTGCTGATG ATGTGCGGCG GCTCGCTCGT GATCGCGGTC CTGCCGACCT ATGCACAGAT CGGCGCGCTC GCGCCGGCGC TGCTGCTGGT CGCGCGCCTG TTCCAGGGGC TGTCGGTGGG CGGCGAATAC GGCACGAGCG CGACCTACAT GAGCGAGGTC GCGTTGAAGG GGCGGCGCGG CTTCTTTGCG TCGTTCCAGT ACGTGACGCT GATCGGCGGC CAGCTGTGCG CGCTGCTGGT GCTCGTGATC CTGCAGCAGA CGCTGTCGAC TGACGAACTG AAGGCGTGGG GCTGGCGCAT TCCGTTCGTC TGCGGCGCGG CGGCCGCGCT GATCTCGCTG TACCTGCGCA AATCGCTCGA CGAGACGTCG ACGAGCGCGT CGCGCGACAA GAAGGACGCG GGCACGATCC GCGGCGTGTG GCAGCACAAG GGCGCATTCT TCACGGTGGT CGGCTTCACG GCCGGCGGCT CGCTGATCTT CTACACGTTC ACGACGTACA TGCAGAAGTA CCTGGTGAAC ACGGCCGGCA TGCATGCGAA GACGGCCAGC AACGTGATGA CCGTCGCGCT GCTCGTCTAC ATGCTGATAC AGCCGGTGTT CGGCGCGCTG TCCGACAAGA TCGGCCGCCG CACGTCGATG ATCCTGTTCG GCACGTTCGC GGTGATCGGC ACGGTGCCGC TGATGCACAC GCTGAAGACA GTGACGAGCC CGACGGCCGC GTTCGTGCTG ATCACGATCG CGCTGGCGAT CGTCAGCTTC TACACGTCGA TCAGCGGCCT CATCAAGGCC GAGATGTTCC CGCCCGAAGT GCGCGCGATG GGCGTCGGCC TGTCGTATGC GGTCGCGAAC GCGCTCTTCG GCGGCTCGGC CGAGTACGTC GCGCTGTGGT TCAAGTCGGT CGGCAGCGAG GAAACCTTCT ACTGGTACGT GACGGCGCTG TGCGCGGTGT CGCTGATCGT GTCGTGGCGG ATGCGCGACC CGAGCAAGGA AGGGTATCTG CGTCACGAGC CGTGA
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Protein sequence | MDVQTDQAAL SAHDTRRRVF AIVGASSGNL VEWFDFYIYS FCALYFAPAF FPSGNSTTQL LNTAGVFAAG FLMRPIGGWL FGRIADRHGR RAAMMISVLM MCGGSLVIAV LPTYAQIGAL APALLLVARL FQGLSVGGEY GTSATYMSEV ALKGRRGFFA SFQYVTLIGG QLCALLVLVI LQQTLSTDEL KAWGWRIPFV CGAAAALISL YLRKSLDETS TSASRDKKDA GTIRGVWQHK GAFFTVVGFT AGGSLIFYTF TTYMQKYLVN TAGMHAKTAS NVMTVALLVY MLIQPVFGAL SDKIGRRTSM ILFGTFAVIG TVPLMHTLKT VTSPTAAFVL ITIALAIVSF YTSISGLIKA EMFPPEVRAM GVGLSYAVAN ALFGGSAEYV ALWFKSVGSE ETFYWYVTAL CAVSLIVSWR MRDPSKEGYL RHEP
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