| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1517 |
|---|
| Symbol | |
|---|
| ID | 6176833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1678229 |
|---|
| End bp | 1679266 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681278 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | YP_001808220 |
|---|
| Protein GI | 172060568 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.485355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC GCAATACGGG GCTGGTGGGC GGAGCGGGCC GCCTGATCGC AACACTCGCG
CTGGGCGCGG CGGCGGCGCT GGGCGTCGTC ACGCACGCGC AGGCCGATAC AACGTTCCTG
AACGTGTCGT ACGACCCGAC GCGCGAGCTG TATCAGGACT TCAACCAGGC GTTCGGCAAG
GCGTGGAAGG CGAAGACGGG CGAGACGGTC AACTTCAAGC AGTCGCACGG CGGCTCGGGC
GCGCAGGCGC GCTCGGTGCT CGACGGCCTG CAGGCCGACG TCGTCACGCT GGCGCTCGCC
TACGACATCG ACGCGCTCGC CAACAAGGGG CTGGTGAACA AGGACTGGCA AAAGCGCCTG
CCGGACAACG CATCGCCTTA CACGTCGACG ATCGTGTTCC TCGTGCGCAA GGGCAACCCG
AAAGGGATCA AGGACTGGGA CGACCTCACC AAGCCGGGCA TCTCGATCGT CACGCCGAAC
CCGAAGACCT CGGGCGGTGC GCGCTGGAAC TACCTGGCCG CGTGGTCGTA TGCCGTGCAC
AAGCCGGGCG GTAACGAGCA GGGCGCGAAG GAATTCGTGA CGAAGCTCTA CAAGAACGCA
GGCGTGCTCG ATTCGGGCGC GCGTGGCGCG ACGACGAGCT TCGTGCAGCG CGGGATCGGC
GACGTGCTGA TCGCGTGGGA GAACGAGGCG TTCCTGTCGA TCAAGGAATT CGGCACCGAC
AAGTTCGAGA TCGTCGTGCC GTCGGTGAGC ATCCTGGCCG AGCCGCCCGT CGCGGTGGTC
GACAAGGTGG TGGACAAGAA GGGCACGCGC AAGCTGGCGG AGGCCTACCT GAATTTCCTG
TACAGCCCGC AGGGCCAGGA GATCGCCGCG CGCAACTACT ACCGTCCGCG TTCGAAGAAC
GTGCCGGCGG AGCTGACCAA GCAGTTCCCG AAGCTGAAGC TGTACACGGT CGACGACACG
TTCGGCGGCT GGACGAATGC GCAGAAGACG CATTTCGCGG ACGGCGGCGT GTTCGACTCG
ATCTACAAGC CGCAGTAA
|
|---|
| Protein sequence | MAKRNTGLVG GAGRLIATLA LGAAAALGVV THAQADTTFL NVSYDPTREL YQDFNQAFGK
AWKAKTGETV NFKQSHGGSG AQARSVLDGL QADVVTLALA YDIDALANKG LVNKDWQKRL
PDNASPYTST IVFLVRKGNP KGIKDWDDLT KPGISIVTPN PKTSGGARWN YLAAWSYAVH
KPGGNEQGAK EFVTKLYKNA GVLDSGARGA TTSFVQRGIG DVLIAWENEA FLSIKEFGTD
KFEIVVPSVS ILAEPPVAVV DKVVDKKGTR KLAEAYLNFL YSPQGQEIAA RNYYRPRSKN
VPAELTKQFP KLKLYTVDDT FGGWTNAQKT HFADGGVFDS IYKPQ
|
|---|
| |