| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1508 |
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| Symbol | |
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| ID | 6179085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1670685 |
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| End bp | 1671812 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681269 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001808211 |
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| Protein GI | 172060559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.154037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGAACC TGATTGTCAC CCTCGATCGC GCTGGCGAGT TCGACGAGAT CATCGACGTG
CGTACGCCGC TCGAGTTCGC CGAAGATCAT ATTCCCGGCG CGCTGAACGC ACCCGTGCTC
AGCAACGAGG AGCGCGTGAT CGTCGGCACG ATGTACCGTC AGGTGTCGCC GTACGAAGCG
ACGCGCGTCG GCGCGGCGAT GGTCGCACGC AACATCGCGC GCCATCTCGA CACCACGTTC
GCCGACCGTC CGCGCAACTG GCGGCCGCTA ATCTACTGCT GGCGCGGCGG CAAGCGCTCG
GGCTCGATGA CGACCTGGTT CAACCTGATC GGCTGGCAGG CGCGGCAGCT CGACGGCGGC
TACAAGGCAT ATCGCCGCTC GGTGTGCGCG ACGCTCGATA CACTGCCCAC GCGGTTCCGC
TACATCGCGC TCGTCGGCCA TACGGGCTGC GGCAAGACGC GGCTCTTGAA CGCGCTGCGC
GACGAAGGGG CGCAGACGCT CGATCTCGAG GCGCTCGCCT GTCACCGCGG CTCGCTGCTC
GGCGCATTGC CGGGTGTGCC GCAGCCCGCG CAGAAGTCGT TCGATTCGGG CCTCGTCGGC
GCGCTGGAGC GTTTCGACCC CGCCTGGCCC GTCTTCGTCG AATCGGAAAG CCGCAAGATC
GGGCTCGTGC AGTTGCCGCT CGCGCTGATG GACGCGTTTC GCGCGGGGCC GTGGGTGCAG
GTCGAGGCCG AGCGTGACGA ACGCATCGCG TTCCTGCTCG AGGACTACGC CCACCTGTTC
GACGATCCGG CCGCGTTCAA GGCGCAGCTG CATCGCCTGA TCGGCCTGCA CAGCCGGGAA
GAGGTCGCGC GCTGGAACGC ACTGATCGAC GCGAACGCGC GCGCCGAACT GTTCGGCACG
CTGATCGACA AGCATTACGA TCCTGCGTAT GCACGCACCT ATCGTTCGTC GTACGACAAA
TCGAACCGCG TGCTGACGTT CACGTTCCGG CCGAATGCGG CCGACGTGCG CCAGCAGGCG
CGCGCGCTGC TCGACGCGCT CGCGCGCGCC GGGCTTCCGG CGTCGCCCGT CGCCGGCGAC
GCAGCAGGAT CCAACACCGA CACAAACCAA TCGACCACCA CACGATGA
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| Protein sequence | MKNLIVTLDR AGEFDEIIDV RTPLEFAEDH IPGALNAPVL SNEERVIVGT MYRQVSPYEA
TRVGAAMVAR NIARHLDTTF ADRPRNWRPL IYCWRGGKRS GSMTTWFNLI GWQARQLDGG
YKAYRRSVCA TLDTLPTRFR YIALVGHTGC GKTRLLNALR DEGAQTLDLE ALACHRGSLL
GALPGVPQPA QKSFDSGLVG ALERFDPAWP VFVESESRKI GLVQLPLALM DAFRAGPWVQ
VEAERDERIA FLLEDYAHLF DDPAAFKAQL HRLIGLHSRE EVARWNALID ANARAELFGT
LIDKHYDPAY ARTYRSSYDK SNRVLTFTFR PNAADVRQQA RALLDALARA GLPASPVAGD
AAGSNTDTNQ STTTR
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