| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1490 |
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| Symbol | |
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| ID | 6178883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1655070 |
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| End bp | 1656056 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681250 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001808193 |
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| Protein GI | 172060541 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT GGACCGACCG TCATTGCCGG TCGTTCCATC GCACGCTGAC GCGCGACACG
TGGCTGTATA CGGAAATGAT CACCACGGGC GCGTTGCTGT TCGGCGATGC GCAGCGGCAC
CTCGCGTTCA CGCCGAACGA ATCGCCGGTC GCGCTGCAGT TGGGCGGCAG CGAGCGGGAC
GATCTCGCGC GCGCCGCGAA ACTCGGCGAG CAATGGGGCT ACGACGAGAT CAACCTGAAT
TGCGGCTGCC CGTCCGAGCG CGTGCAGCGT GGCGCGTTCG GCGCGTGCCT GATGAACGAG
CCGCAGCTCG TCGCCGACTG CGTGAAGGCG ATGCGAGATG CGGTGTCGGT GCCGGTGACG
GTCAAGCACC GGATCGGCGT CGACGCGGTC GAGGATTATG CGTTCGTGCG GGACTTCGTC
GGCAAGGTGG CGGAAGCGGG CTGCGAGACG TTCGTCGTGC ACGCGCGCAA CGCGATCCTG
AAGGGGCTGT CGCCGAAGGA GAACCGCGAG ATCCCGCCGC TCAAGTACGA CTATGCGTAT
CAACTGAAGC GCGATTTTCC GTCGCTGGAG ATCGTGATCA ACGGCGGGAT CAAGACGCTC
GACGAAGTCG CGCAGCATCT CGAACATGTC GACGGCGTGA TGCTTGGCCG CGAGGCTTAT
CACAACCCGT ATGTGCTCGC GGGCGTCGAT GCGCGCTTCT ATGGTTCGAC CGCGGCGGTG
CCGACGCGCG AAGAGGCCGA GGCGAAACTG ATCGAATACT GCGCGGCGGA ACTGAAGCGC
GGCACGTATC TAGGCGCGAT CGTCCGGCAC GCACTCGGGC TGTATCGCGG CGTCGGCGGT
GCACGCGGCT GGCGTCGTGT GCTGTCGGAC AACAAGAAGC TCGCGCGCGG CGATCTGGCC
GTGTTCGACG AGGCGCGCAC GCATCTGAAC GACGCGATCG AAAATTTTGA AAAAAATGCT
TTGCAAGACG GAAAAGTGTT CGTATAA
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| Protein sequence | MLDWTDRHCR SFHRTLTRDT WLYTEMITTG ALLFGDAQRH LAFTPNESPV ALQLGGSERD
DLARAAKLGE QWGYDEINLN CGCPSERVQR GAFGACLMNE PQLVADCVKA MRDAVSVPVT
VKHRIGVDAV EDYAFVRDFV GKVAEAGCET FVVHARNAIL KGLSPKENRE IPPLKYDYAY
QLKRDFPSLE IVINGGIKTL DEVAQHLEHV DGVMLGREAY HNPYVLAGVD ARFYGSTAAV
PTREEAEAKL IEYCAAELKR GTYLGAIVRH ALGLYRGVGG ARGWRRVLSD NKKLARGDLA
VFDEARTHLN DAIENFEKNA LQDGKVFV
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