Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1479 |
Symbol | |
ID | 6176673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1647143 |
End bp | 1647688 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681238 |
Product | NUDIX hydrolase |
Protein accession | YP_001808182 |
Protein GI | 172060530 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.277899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT GCTCCGTCTG CGGTCACGAC GTCATCGCAC GCATTCCTCC GGGCGATAAC CGCGAGCGCT TCATTTGCGA TCACTGCGGC ACGATCCATT ATCAGAATCC GCGCAACGTG GTCGGCACGG TGCCGGTCTG GGGCGATCAG GTGCTGCTGT GCCGCCGCGC GATCGAACCG CGCTACGGGT TCTGGACGCT GCCGGCGGGC TTCATGGAGA TGGGCGAGAC GACGGCCGAG GCCGCCGCGC GCGAAACGCT CGAGGAAGCC GGCGCGCGTG TCGAGGTGCA GAACCTGTTC ACGCTGCTCA ACGTGCCGCA CGTGCATCAG GTCCACCTGT TCTACCTGGC GCGGCTCGTC GATCCGGCTT ACGAGGCCGG CGAGGAAAGC CTCGAGGTCA AGCTGTTCGA CGAAGCCGAC ATTCCGTGGG ACGAGATCGC GTTCCCGACC GTCAGCCAGA CCCTGCGCTT CTTCTTCGCC GATCGCGCCG CCGGCGACTA CGGCGTGCAT ACCGGCGATA TCTTCCGCTC GCTGCGCAAC GGCTGA
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Protein sequence | MKFCSVCGHD VIARIPPGDN RERFICDHCG TIHYQNPRNV VGTVPVWGDQ VLLCRRAIEP RYGFWTLPAG FMEMGETTAE AAARETLEEA GARVEVQNLF TLLNVPHVHQ VHLFYLARLV DPAYEAGEES LEVKLFDEAD IPWDEIAFPT VSQTLRFFFA DRAAGDYGVH TGDIFRSLRN G
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