| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1474 |
|---|
| Symbol | |
|---|
| ID | 6176507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1642575 |
|---|
| End bp | 1643354 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641681233 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001808177 |
|---|
| Protein GI | 172060525 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGCA TCCGAAACGA TGCCGCCCTT TGTTTTATCG GTCCGGTTTA TGATTGCGCT
TTCGCGCACG CACTCGCTTC GTATTCCATG TCGACAACGT CCCTGCTCGT TCAATCGCTG
CCGGTGCTCG CCCAGGGTGC CGTACTGACC GTCAAGTTCG CCGTGCTGTC GATGGTGTTC
GGCCTGCTCG GCGCCGTCAT GCTCGCGATG ATGGGCATCC GGCAAAGCGA ACCGCTCGAA
GGCTTCGAAC GCATCTGGGT CAACGCGCTC GCGTGGCTTG CGCGCGCGTA TGTGAGCCTG
ATGCGCGGCA CGCCGCTGCT CGTGCAGATC TTCGTGATTT ATTACGGATT GCCGAGCCTC
GGCATCTCGC TCGATCCGAC GCCGGCCGGC GTCATCGCGC TGTCCGCGAA CGTCGCCGCT
TACATGTCCG AAAGCATGCG CGGCGCGATC AATGGGATCG CGCGCGGCCA ATGGCTGGCC
GCCTACAGCC TCGGGCTGTC GTGGGGGCAG ACGCTGCGCT ACGTGATCGG CCCGCAGGCG
CTGCGCATCG CGGTGCCGAG CCTGTCGAAC AGCCTGATCA GCCTGATCAA GGACACGTCG
CTCGTGTCCG TGATCACCGT GACCGAGCTG CTGCGCAGCG CGCAGGAAGT GATCGCGGCG
ACCTATCAGC CGTTGCCGCT GTACCTCGCC GCCGCTGCCG TCTACTGGGT GCTGTGCCAG
ATCCTCGAAT GGGTCCAGCG CTGGTACGAA AAGCGCCTGT CGCTGCCCGC GCGGCACTGA
|
|---|
| Protein sequence | MGGIRNDAAL CFIGPVYDCA FAHALASYSM STTSLLVQSL PVLAQGAVLT VKFAVLSMVF
GLLGAVMLAM MGIRQSEPLE GFERIWVNAL AWLARAYVSL MRGTPLLVQI FVIYYGLPSL
GISLDPTPAG VIALSANVAA YMSESMRGAI NGIARGQWLA AYSLGLSWGQ TLRYVIGPQA
LRIAVPSLSN SLISLIKDTS LVSVITVTEL LRSAQEVIAA TYQPLPLYLA AAAVYWVLCQ
ILEWVQRWYE KRLSLPARH
|
|---|
| |