Gene BamMC406_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1466 
Symbol 
ID6176678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1631243 
End bp1632490 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content71% 
IMG OID641681223 
ProductROK family protein 
Protein accessionYP_001808170 
Protein GI172060518 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.473934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCC CGCACATCGG CCAGGGAAGC AACTCGGCCA ACGTGCGCCG TTACAACGAG 
CGCCTGCTGT TGAAGACGCT GCGCCGTGCG GGCAGCGCGT CGAAGGCCGA CCTTGCGCGT
CTCGCGAGCA TGACGGGCAC GGCGGTCGGC AGCATCATCG CGTCGCTCGC CGACGCGAAG
CTGATCGAAT TCGCCGGCCG CACCGAGGGC CAGCGCGGCC AGCCGGCATC GCTGATCCGT
CTCGATCCGC GCGGTGCGTT CGGCATCGGC GTCCATCTCG ACCGGATGCG CATCGAGACA
GCGCTCGTCA ATTTCGCGGG CGACGTGCTC GGCCGCCGCT CGCACGACAC GCTGCTTCCC
CCGCCCGCCG ACGTGCTCGA CATCGTGCGG CGCGACATCG ATGGGATGCA GGATCTGCTC
CCCGCGCATG AGCGCGCCCG CCTCACCGGC GTCGGCGTCG CCCAGCCGTA CAACCTCGGC
GCGTGGATGC GCGAGCTCGG CCTCGCGCCC GACACGTTCC GCGCATGGGA AGACGTCGAT
TTCGCAAGCG ATCTCGGGCG CATGCTGTCG CTGCCCGTGT TCGGCGAAAA CGACGGCAAC
GCCGCCGCGA TCGCCGAACT GTTCTACGGG TACGGCCGGC AGTGCGACGA CTTCGTCTAC
CTGTTCATCG GCCCCGCGAT CGGCGGCGGC ATCGCGGTCG ACGGAGACTG CCTGCGCGGC
GTGACCGGCA ATGCCGGCGA CATCGCCGTG ATTCCCGTGC CGCCGAGTCG GCTGGCGTCC
GCACCGCCGC CGCGCGGCCC GTGGGACATC CTGCTCGCCC GCGCTTCGCT GCATGCGCTC
GTGCGCCACC TGCGCCATCA CGGCGAGACG GTCGAGAATC GCGCCGACCT CGAGGCCTGC
ATCGCGCGCG GCCTGCCGGC GGTCGACGAG TGGATCGACG ACTGCGTCGA CGCGCTCGCA
CCGGCATTGC GCGCGGTGCT GTGCGTCGTC GATGCGCCGG TGGTGGTGCT CGACGCCGAT
ACCGACGCCG GCCTGCTCGA CGCGGTGACG ACCCGCCTGC GCGCGGCCCT CGTCGCCACC
GCGCCGGAAG CGCGCGGCAC GCCGACGCTC GTGCGCGGCA CGTTCGGCGC CGACGCCGGT
GCGATCGGCG CCGCGACGCT GCCGATGTTC TTCAACTTCT CCCCGCGGGC CGGCATCCTC
AAGGGCGCCC GCACCGAATC GCAGGAGGTC AACCATGTCG CGTTCTGA
 
Protein sequence
MRSPHIGQGS NSANVRRYNE RLLLKTLRRA GSASKADLAR LASMTGTAVG SIIASLADAK 
LIEFAGRTEG QRGQPASLIR LDPRGAFGIG VHLDRMRIET ALVNFAGDVL GRRSHDTLLP
PPADVLDIVR RDIDGMQDLL PAHERARLTG VGVAQPYNLG AWMRELGLAP DTFRAWEDVD
FASDLGRMLS LPVFGENDGN AAAIAELFYG YGRQCDDFVY LFIGPAIGGG IAVDGDCLRG
VTGNAGDIAV IPVPPSRLAS APPPRGPWDI LLARASLHAL VRHLRHHGET VENRADLEAC
IARGLPAVDE WIDDCVDALA PALRAVLCVV DAPVVVLDAD TDAGLLDAVT TRLRAALVAT
APEARGTPTL VRGTFGADAG AIGAATLPMF FNFSPRAGIL KGARTESQEV NHVAF