Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1466 |
Symbol | |
ID | 6176678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1631243 |
End bp | 1632490 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641681223 |
Product | ROK family protein |
Protein accession | YP_001808170 |
Protein GI | 172060518 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.473934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCC CGCACATCGG CCAGGGAAGC AACTCGGCCA ACGTGCGCCG TTACAACGAG CGCCTGCTGT TGAAGACGCT GCGCCGTGCG GGCAGCGCGT CGAAGGCCGA CCTTGCGCGT CTCGCGAGCA TGACGGGCAC GGCGGTCGGC AGCATCATCG CGTCGCTCGC CGACGCGAAG CTGATCGAAT TCGCCGGCCG CACCGAGGGC CAGCGCGGCC AGCCGGCATC GCTGATCCGT CTCGATCCGC GCGGTGCGTT CGGCATCGGC GTCCATCTCG ACCGGATGCG CATCGAGACA GCGCTCGTCA ATTTCGCGGG CGACGTGCTC GGCCGCCGCT CGCACGACAC GCTGCTTCCC CCGCCCGCCG ACGTGCTCGA CATCGTGCGG CGCGACATCG ATGGGATGCA GGATCTGCTC CCCGCGCATG AGCGCGCCCG CCTCACCGGC GTCGGCGTCG CCCAGCCGTA CAACCTCGGC GCGTGGATGC GCGAGCTCGG CCTCGCGCCC GACACGTTCC GCGCATGGGA AGACGTCGAT TTCGCAAGCG ATCTCGGGCG CATGCTGTCG CTGCCCGTGT TCGGCGAAAA CGACGGCAAC GCCGCCGCGA TCGCCGAACT GTTCTACGGG TACGGCCGGC AGTGCGACGA CTTCGTCTAC CTGTTCATCG GCCCCGCGAT CGGCGGCGGC ATCGCGGTCG ACGGAGACTG CCTGCGCGGC GTGACCGGCA ATGCCGGCGA CATCGCCGTG ATTCCCGTGC CGCCGAGTCG GCTGGCGTCC GCACCGCCGC CGCGCGGCCC GTGGGACATC CTGCTCGCCC GCGCTTCGCT GCATGCGCTC GTGCGCCACC TGCGCCATCA CGGCGAGACG GTCGAGAATC GCGCCGACCT CGAGGCCTGC ATCGCGCGCG GCCTGCCGGC GGTCGACGAG TGGATCGACG ACTGCGTCGA CGCGCTCGCA CCGGCATTGC GCGCGGTGCT GTGCGTCGTC GATGCGCCGG TGGTGGTGCT CGACGCCGAT ACCGACGCCG GCCTGCTCGA CGCGGTGACG ACCCGCCTGC GCGCGGCCCT CGTCGCCACC GCGCCGGAAG CGCGCGGCAC GCCGACGCTC GTGCGCGGCA CGTTCGGCGC CGACGCCGGT GCGATCGGCG CCGCGACGCT GCCGATGTTC TTCAACTTCT CCCCGCGGGC CGGCATCCTC AAGGGCGCCC GCACCGAATC GCAGGAGGTC AACCATGTCG CGTTCTGA
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Protein sequence | MRSPHIGQGS NSANVRRYNE RLLLKTLRRA GSASKADLAR LASMTGTAVG SIIASLADAK LIEFAGRTEG QRGQPASLIR LDPRGAFGIG VHLDRMRIET ALVNFAGDVL GRRSHDTLLP PPADVLDIVR RDIDGMQDLL PAHERARLTG VGVAQPYNLG AWMRELGLAP DTFRAWEDVD FASDLGRMLS LPVFGENDGN AAAIAELFYG YGRQCDDFVY LFIGPAIGGG IAVDGDCLRG VTGNAGDIAV IPVPPSRLAS APPPRGPWDI LLARASLHAL VRHLRHHGET VENRADLEAC IARGLPAVDE WIDDCVDALA PALRAVLCVV DAPVVVLDAD TDAGLLDAVT TRLRAALVAT APEARGTPTL VRGTFGADAG AIGAATLPMF FNFSPRAGIL KGARTESQEV NHVAF
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