| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1463 |
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| Symbol | |
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| ID | 6176620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1627594 |
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| End bp | 1628538 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681220 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001808167 |
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| Protein GI | 172060515 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGC ACAAAGCCGC CCTGACCGCC GTCGCCTGCA CGCTCGCATT CGGCGCTGCC
GCCGCCCACG CAGCCGACAA GCCGCTGAAA TCGATCGGCG TCACGGTCGG ATCGCTCGGC
AATCCGTACT TCGTCACGAT CGTGAAAGGC GCCGAAGCGC GCGCGAAACA GCTCAACCCG
AACGCGAAAG TAACCGCGGT ATCGGCCGAC TACGACCTGA ACAAGCAGTT CACGCAGATC
GACAACTTCA TCTCCGCGCA CGTCGACATG ATCCTGCTCA ACGCGACCGA TCCGAAGGCG
ATCGAGCCGG CGGTGAAGAA GGCGCAGGCG GCCGGCATCA CGGTCGTCGC GGTGGACGTC
GCGGCAGCCG GCGCGAACGC GACCGTGCAG ACCAACAACG TGAAGGCCGG CGAGCTGGCG
TGCGACTATC TCGCGAAGAA ACTCAACGGC AAGGGTAACG TGATCATCGA GAACGGCCCG
CAAGTGTCGG CCGTGATCGA TCGCGTGAAC GGCTGCAAGG CGGTGCTCGC GAAGAACCCT
GGCATCAAGC TGCTGTCGAG CGACCAGGAC GGCAAGGGCT CGCGCGAAGG CGGGATGAAC
TCGATGCAGG GCTACCTGAC GCGCTTTCCG AAGCTCGACG GCGTGTTCAC GATCAACGAC
CCGCAGGCGA TCGGCAGCGA TCTCGCGGCG AAACAGCTGA ATCGCCCGAA CATCGTGATC
ACGTCGGTCG ACGGCGCGCC CGACATCGAG GTGGCGCTCA AGTCCAACAC GCTCGTGCGG
GCATCGTCGA GCCAGGATCC GTGGGCGATG GCGCAGCAGG CCGTCAACGT CGGCTACGGA
ATCATGAACG GCCAGAAGCC GGCCAATCCG ATGATCCTGA TCGAGCCGAC GCTCGTCACG
CGCGACAACG TGAAGGGCTA CAAGGGCTGG ACCAGCCCGC GCTGA
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| Protein sequence | MFKHKAALTA VACTLAFGAA AAHAADKPLK SIGVTVGSLG NPYFVTIVKG AEARAKQLNP
NAKVTAVSAD YDLNKQFTQI DNFISAHVDM ILLNATDPKA IEPAVKKAQA AGITVVAVDV
AAAGANATVQ TNNVKAGELA CDYLAKKLNG KGNVIIENGP QVSAVIDRVN GCKAVLAKNP
GIKLLSSDQD GKGSREGGMN SMQGYLTRFP KLDGVFTIND PQAIGSDLAA KQLNRPNIVI
TSVDGAPDIE VALKSNTLVR ASSSQDPWAM AQQAVNVGYG IMNGQKPANP MILIEPTLVT
RDNVKGYKGW TSPR
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