| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1458 |
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| Symbol | |
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| ID | 6177148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1621910 |
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| End bp | 1623130 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681215 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001808162 |
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| Protein GI | 172060510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.34861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGA CCCGCGAACA ACGCAACGTC ACGATCGCCG CCTACCTCGG CTGGACGCTC
GACGCGTTCG ACTTTTTCCT GATGGTCTTC GTGCTGAAGG ACATCGCCGC CGAATTCGCG
TCGACGATCC CCGCCGTCGC GTTCGCGCTC ACGCTGACGC TCGCGATGCG CCCGATCGGT
GCGTTGATCT TCGGCCGGCT CGCCGATCGC TTCGGCCGCC GCCCGACGCT GATGGTCAAC
ATCGCGTGCT ATTCGCTGAT CGAACTCGCG TCGGGCTTCG CGCCGAGCCT GACCGCGCTG
CTGGTGCTGC GCGCGCTGTT CGGCATCGCG ATGGGCGGCG AATGGGGCGT CGGCTCCGCG
CTGACGATGG AAACCGTGCC GACCCATGCG CGCGGCTTCG TGTCGGGCTT GCTGCAGGCC
GGTTATCCGA GCGGCTATCT GCTCGCGTCC GTCGTGTTCG GCCTGCTCTA CCAATACATC
GGCTGGCGCG GGATGTTCAT GGTCGGCGTG CTGCCCGCGC TGCTCGTGCT GTACGTGCGT
GCGCACGTGC CCGAGTCGCC TGCGTGGAAG CAGATGGAAA AGCGTCCGCG GCCGAGCCTC
GGCGCGACGC TGCAGCAGAA CTGGAAGCTC ACGATCTACG CGATCGTGCT GATGACCGCG
TTCAACTTCT TCTCGCACGG CACGCAGGAT CTCTACCCGA CCTTCCTGCG CGAACAGCAT
CACTTCGATC CGCACACCGT GTCGTGGATC ACGATCGTGC TGAACCTCGG TGCGATCGTC
GGCGGCCTGT CGTTCGGCGC GATCTCGGAG CGGATCGGCC GCCGGCGCGC GATCTTCATC
GCGGCGCTGA TCGCGCTGCC GGTGCTGCCG CTGTGGGCGT TCTCGAGCGG CCCGGTCGCG
CTCGCCGCCG GCGCGTTCCT GATGCAGATC TCGGTGCAGG GGGCGTGGGG CGTGATCCCC
GTTCACCTGA ACGAGATCTC GCCCGACGAG ATCCGCGCGA CGTTCCCGGG CGTCGTCTAC
CAGCTCGGCA ACCTGCTGGC GTCGGGTAAC GCGACGATGC AGGCGTCGCT CGCGGTTTCG
CAGGGCAACA ACTACAGTTT TGCGCTCGCG CTCGTCGCCG GCACCGTCGC CGTCGTGATC
GCCGTGCTGA TCATATTCAG CCGCGAACGC CGCGGCATCG ACATGACGCA ATCGGTCAAT
ACGCGTACCG CCGTCGGCTG A
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| Protein sequence | MSWTREQRNV TIAAYLGWTL DAFDFFLMVF VLKDIAAEFA STIPAVAFAL TLTLAMRPIG
ALIFGRLADR FGRRPTLMVN IACYSLIELA SGFAPSLTAL LVLRALFGIA MGGEWGVGSA
LTMETVPTHA RGFVSGLLQA GYPSGYLLAS VVFGLLYQYI GWRGMFMVGV LPALLVLYVR
AHVPESPAWK QMEKRPRPSL GATLQQNWKL TIYAIVLMTA FNFFSHGTQD LYPTFLREQH
HFDPHTVSWI TIVLNLGAIV GGLSFGAISE RIGRRRAIFI AALIALPVLP LWAFSSGPVA
LAAGAFLMQI SVQGAWGVIP VHLNEISPDE IRATFPGVVY QLGNLLASGN ATMQASLAVS
QGNNYSFALA LVAGTVAVVI AVLIIFSRER RGIDMTQSVN TRTAVG
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