Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1456 |
Symbol | |
ID | 6178629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1618916 |
End bp | 1620670 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681213 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001808160 |
Protein GI | 172060508 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.877669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCAT CCGCAGCAAC CGCAACGTCC GAGCTCCCGC CGAACAGCGA CGGCGTCTGG TACGCGTCGT ATCCGCCCGG CGTGCCGCAC GAGATCGACG TCACGCAATA CGCGTCGCTC GTGCAGTTCT TCGACGAATG CACGACGCGC TTCGCCGAGC GGGTCGCGTA CGTGAGCGCG GGCGCATCGA TGACCTATCG CACGCTCGCG CAGAAAGTCG ACGCGTTCGC GTCGTATCTG CAAAGCATCG GCGTAAAGCC CGGCGACCGC GTCGCGATCA TGCTGCCGAA CACGTTCCAG TACCCGGTCG CGCTGTTCGG CACGCTGAAG GCCGGCGCGA TCGTCGTCAA CGTGAATCCG CTCTATACCG CGCGCGAACT CGCGCACCAA TTGAAGGACA GCGGCGCGCA GACGATCGTC GTGTTCGAGA ACTTCGCACG CACGCTGCAG GAAGCGCTGC CGGAAACGCA GGTGAAGAAC ATCGTTGTCA CCGCGCTCGG CGACCTGCTC GCCGACGGTT TCAATGCGAA GGGACGCCTG ATCAACTTCG TGCTGAAGCA CGTGAAGAAG CTGGTGCCTG ACTACAGCCT GCCGCAGGCG ATCCGGCTGC GCTCCGCCCT CGCGCTCGGC GCGCGCGGCA AACCGCAGCC GGTGCCAACG ACGCGCGACG ATCTCGCATT CCTGCAATAC ACCGGCGGCA CGACCGGCGT CGCGAAAGGC GCGATGCTCA CGCACGGCAA CCTGATCGCG AACCTGCTGC AGGCCAAGGC GTGGATCGCC GATCAGGTGT CGGGCGACGT CGAGACCGTG CTGACGCCGC TGCCGCTCTA TCACATCTAT TCGCTGACGG TGAACGCGTT CATCTTCATG GGGCTCGGCG GGCGCAACAT CCTGATCGCG AACCCGCGCG ACATGAAGAT GGTGATGAAG ATCATCCGCA ACGAAACGTT TACCGGAATC ACCGGCATCA ACACGCTGTA CAACGCGTTC CTCGACAACG AGGAATTCCG CAAGCGCGAC TTCTCGCAGC TCAAGCTCGC GATGGCGGGC GGGATGGCGA TGCAGCGCGC GGTCGCGGAG CGCTTCCAGC AGGTCACGGG GCGGCCGGTC GTCGAAGGCT ACGGCCTCAC CGAATGCTCA CCGATCGTCA CGATGAATCC GGTGAACCTG AACGACATGG GCGAATTCAG CGGCTCCATC GGCCTGCCCG CGCCGTCGAC GCTCGTGCGC TTTCGCCGCG AGGACGGCAC CTGGGCCGCC GTCGGCGAGC CCGGCGAGCT GTGCGTGCAC GGGCCGCAGG TGATGCGCGG CTACTGGCAG CGGCCCGACG AGACCGCGAA GGTGATCGAC GCCGACGGCT GGCTCGCCAC CGGCGACATC GGCGTGATGG ACGAGCGCGG CTTCATCCGC CTCATCGACC GCAAGAAGGA CATGATCCTC GTGTCGGGCT TCAACGTGTA TCCGAACGAG ATCGAGGAAG TGCTGGTGAC GCATCCGGGC ATCAGCGAAG CCGCTGCCAT CGGTATCCCG GACGGAGTCC AGGGCGAACG GATCAAGGTC TTCGTCGTGC GCCGCGACCC GACGCTGACG GTGGACGACG TGCTCGCGCA CTGCCGCAAG AACCTGACCG GCTACAAGAT GCCGAAGTTC GTCGAGTTCC GCGACGCGCT GCCGCAGACC AACGTCGGCA AGATCCTGCG CCGCGCGCTG CGCGACGAGG AGCTCGCCAG GATCAAGGCC GCGAAACAAG GCTGA
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Protein sequence | MSSSAATATS ELPPNSDGVW YASYPPGVPH EIDVTQYASL VQFFDECTTR FAERVAYVSA GASMTYRTLA QKVDAFASYL QSIGVKPGDR VAIMLPNTFQ YPVALFGTLK AGAIVVNVNP LYTARELAHQ LKDSGAQTIV VFENFARTLQ EALPETQVKN IVVTALGDLL ADGFNAKGRL INFVLKHVKK LVPDYSLPQA IRLRSALALG ARGKPQPVPT TRDDLAFLQY TGGTTGVAKG AMLTHGNLIA NLLQAKAWIA DQVSGDVETV LTPLPLYHIY SLTVNAFIFM GLGGRNILIA NPRDMKMVMK IIRNETFTGI TGINTLYNAF LDNEEFRKRD FSQLKLAMAG GMAMQRAVAE RFQQVTGRPV VEGYGLTECS PIVTMNPVNL NDMGEFSGSI GLPAPSTLVR FRREDGTWAA VGEPGELCVH GPQVMRGYWQ RPDETAKVID ADGWLATGDI GVMDERGFIR LIDRKKDMIL VSGFNVYPNE IEEVLVTHPG ISEAAAIGIP DGVQGERIKV FVVRRDPTLT VDDVLAHCRK NLTGYKMPKF VEFRDALPQT NVGKILRRAL RDEELARIKA AKQG
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