| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1453 |
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| Symbol | |
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| ID | 6178613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1616771 |
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| End bp | 1617361 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681210 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001808157 |
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| Protein GI | 172060505 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATC CCGCAGAATC CCATCCGCAA AACGACTTCA TCAATTCGGC GCGCAAGGAA
CGTAAGCGTG TTGAAATCTA TCTCGTCAAC GGCATTCGTC TGACGGGGTG TATCGAGTCG
TTCGACCAGT ACCTGGTGAT GCTGCGCACC CCCGTGGGTC TGCAAGGCAT CTACAAGCGT
GCGATTTCCA CGATCCAGCT CGATACGGGC GGCTCGCGCC CGGGCGGCGG CGGCCCCCGC
GGCCCGCGCA CCGGCGGTCG GCCGGGCGGC CGCGAAGGCG GTGGTCACAG CCCGTACGGC
TCGCACGGCG GCTCCCGCGA ATCGCGCGGC GACGGCGGCT ACGGCTCGCG CGAGCCGCGT
GAAGGCTATG GCTCCCGTGA ACCGCGCGAA GGCTATGGCT CCCGCGAACC GCGCGAGGGT
TATGGCGCGC CCCGCGAAGG TTACAGCGCC CCGCGCGAAC CGCGTGAAGG CTACAGCGCG
CCGCGCGACG CCGGCGATGC ATCGGGCAAC ACGTCGCCGT CCGATACACG CGGCGGCAAC
GGGCCGGTGA TCGTCACGCG CCGCCGGCGA ATCGTGCCGG ACGGCCAGTA A
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| Protein sequence | MANPAESHPQ NDFINSARKE RKRVEIYLVN GIRLTGCIES FDQYLVMLRT PVGLQGIYKR
AISTIQLDTG GSRPGGGGPR GPRTGGRPGG REGGGHSPYG SHGGSRESRG DGGYGSREPR
EGYGSREPRE GYGSREPREG YGAPREGYSA PREPREGYSA PRDAGDASGN TSPSDTRGGN
GPVIVTRRRR IVPDGQ
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