| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1446 |
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| Symbol | |
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| ID | 6178056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1609279 |
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| End bp | 1610271 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641681203 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001808150 |
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| Protein GI | 172060498 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.435179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAGCG CGATGATCGG GTTGCTCGCG GTCGCGATGC TGTGCGTTGC ATCGGCACTG
ATGCTATGGC GACACGCGGA AACCCGGCGC GTGCGCACCG ATGCGAAGCG CTTCATCGAC
AGTCGGCTCG AACCCGGTGC GCGCGCGACC GCACCGGCCG CGAGACCTGC GGGACCGGCT
GCGTCGCGGA CCATGTCGCC ATCGGGCGGC GCGCGCAATG CGACGTCTCG CACTTTCTGG
TTGCACTGGT ATGCGATCGC GACGGAGTAT CTGACCAACC TCGTGAACCG TGCCGGGATA
GAAGACGCAC GTGGCAAGAC GATCGTCGCA CTCGTAGTTC TCGTCGTGAT TTCGGGGCTT
GCAGGCAGCC GCGGCGGCGC GCTCGCATGT CTCGCTGCGC TTGTCTGCGG CAGTGCGATT
CTGGGTATCT GGCTGACCTC GCGAATCCAG CGGCGGCGAT TGAAAATCGT CCGGCAGATC
CCGTCGTTTC TCGACGGAAT TGTGCGACTG GTGACGCTTG GCAACAGCGT GCCGGCCGCA
TTTCAGGCAG CACTGCTGAC GACGGAGGAG CCTCTGCGCG GGTGTCTCGA TCACGTGTCC
CGGATGTTGC GTACGGGTGT CGAGATCGAT CGCGCGATGC TCCATATCGC GAAGATCTAC
CGGACACAGG AATTCGAACT TCTTGGATCG GTGCTGCGCC TGTCGGTCAA GTATGGCGGT
CGTGCGGACG TGATGCTCGA ACGCATGGCC GTGTTCATGC GCGACCTCGA GCAGGCGGAG
CGCGAGCTGA CGGCTATGTC GGCAGAGACG CGGCTATCGG CATTCGTGCT CGTGATGCTG
CCGATCGGGA TCGGCAGTTT TGTCGTGATG ACCAATCCGA AATACCTGGA AGGAATGTGG
ATTGATCCAG GCGGACGAAT GCTCCTCGTC CTCGCGTTCC TGCTGCAGAT TGCGGGTAGC
GTGTGGTTGT ATCGAATGGC TCGACTCAGG TGA
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| Protein sequence | MYSAMIGLLA VAMLCVASAL MLWRHAETRR VRTDAKRFID SRLEPGARAT APAARPAGPA
ASRTMSPSGG ARNATSRTFW LHWYAIATEY LTNLVNRAGI EDARGKTIVA LVVLVVISGL
AGSRGGALAC LAALVCGSAI LGIWLTSRIQ RRRLKIVRQI PSFLDGIVRL VTLGNSVPAA
FQAALLTTEE PLRGCLDHVS RMLRTGVEID RAMLHIAKIY RTQEFELLGS VLRLSVKYGG
RADVMLERMA VFMRDLEQAE RELTAMSAET RLSAFVLVML PIGIGSFVVM TNPKYLEGMW
IDPGGRMLLV LAFLLQIAGS VWLYRMARLR
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