Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1442 |
Symbol | |
ID | 6178526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1604250 |
End bp | 1605185 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681199 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001808146 |
Protein GI | 172060494 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.257298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACA ATCTGACAAA AATCATCGCG GGGTTGCTGA TTGCGATCGC TGTTCTGCTC GGAATCTACG CATGGATGCT GGGGCGCAGT GCGTCGCAGC CGGCTCCTGT ACAGCAGGTC ATCGCTGCGA GCCCGGTACC TGTGGTTGTC GCGACGCGTG CGCTACCGGT CGGTCAGCCG ATTGCTGCCG ATGCATTGAA GGTTCAACCG ATCGCTCCAG TGCCGACAGG TGCGTTTGCC GATCCGGCCA TTCTGGTCGG TCGCGTTCCT GCAAGGGACA TCCCGGCGTC GGCCCCGGTC GTGTCGGACT CCTTGGTGTC CGGGCTGGCG GAGGACGTTC AGCCGGGCGA ACGCGCGATT GCGATTCGTG TCGATGAAAC CAATGCCGTC GGCAACCGCC TGCGGCCGGG CAACTTCGTC GACGTATTCG TGAACTTGAA GCGTGAAGCG AGCGGCCCGA TGCTCGACGG CGAGGTTTCG CAGACGCAAG CGCGGCTCCT GATGTCGAAG GTGCGCGTGC TGTCGTTCGG CGACGCGACG CCGGAACGTG ACAGCGGCAG CAACACGAAC GGCAACAACG GTCAGCCGAG TAGTGCGCGC ATCGCGGTAC TCGCGGTACC GACCGCACAG GTCGATGCCC TGACGCTCGG CGAGTCGAGC GGCCGATTGA CGCTCGCGCT GCGCAACCCG CGCGACGACG AGCTTGCGAC GCAGACGGTG GCGGTGCGCA CGGACAACAA GCTGTCGCCG TCGGCGCTTG CCGCGGTCGG CGTATCGCTG CAACAGCTGT CGGGCACGTC GAGGACCGCA GTGGCCAACG TGAATGTGCC ACCACTACCG TCGCGCCCGC CGCTGATGGT GCGGTCAGGC GGTAGCGGAG GCGGGGGCGG CATCGAAGTG ATCCGCGGCG GCCGGTCGGA AACGGTTTTG TATTGA
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Protein sequence | MANNLTKIIA GLLIAIAVLL GIYAWMLGRS ASQPAPVQQV IAASPVPVVV ATRALPVGQP IAADALKVQP IAPVPTGAFA DPAILVGRVP ARDIPASAPV VSDSLVSGLA EDVQPGERAI AIRVDETNAV GNRLRPGNFV DVFVNLKREA SGPMLDGEVS QTQARLLMSK VRVLSFGDAT PERDSGSNTN GNNGQPSSAR IAVLAVPTAQ VDALTLGESS GRLTLALRNP RDDELATQTV AVRTDNKLSP SALAAVGVSL QQLSGTSRTA VANVNVPPLP SRPPLMVRSG GSGGGGGIEV IRGGRSETVL Y
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