| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1440 |
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| Symbol | |
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| ID | 6176243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1603171 |
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| End bp | 1603668 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641681197 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001808144 |
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| Protein GI | 172060492 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.609911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.249163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGTC TTATCTTCAT CGGGGCATTC CTGGGCTGGG CGGCATTCGT CGCGGCTGGC
GATATCCGCT TTCGGCGCAT TCGAAACTCG CTCGTCGTCG CGGGGTTGTT CGGCGCTTTG
GTGGCTGCGG CCATCGGCCG AAATCCATTC GGAATTTCAC TTACCCAATC ACTGGTTGGC
GCGGCGGTGG GGCTCGTTTG CTTTTTCCCG TTATTCGCAT TGCGTGTAAT GGGCGCGGCC
GACGTCAAGG TATTCGCCGT ACTGGGTGCA TGGTGTGGTG CGCCGATGTT GTTGTTGCTC
TGGATTGTCG GGAGCCTCGC GGCAGGCGTT CACGCGCTCT GCGTAATGCT TCTGTCGCGG
ACGTCGGTTT CCGCACTGTA CAAGCGCGCA ACTCCAACGA TGACACTCGG CGGCCGCCGA
GCCACACCTT ACGCGGCATT TCTCGTGATC CCCGCGGCCG TGTGGCTTTT GCATCTTGTG
TATGTGAGGG GAATGTGA
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| Protein sequence | MARLIFIGAF LGWAAFVAAG DIRFRRIRNS LVVAGLFGAL VAAAIGRNPF GISLTQSLVG
AAVGLVCFFP LFALRVMGAA DVKVFAVLGA WCGAPMLLLL WIVGSLAAGV HALCVMLLSR
TSVSALYKRA TPTMTLGGRR ATPYAAFLVI PAAVWLLHLV YVRGM
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