| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1430 |
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| Symbol | sucA |
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| ID | 6176392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1589276 |
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| End bp | 1592140 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641681187 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001808134 |
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| Protein GI | 172060482 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.285696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATG TAATGAAGCA GTTTCAGCTG AACTCCTATC TGTTCGGCGG CAATGCTTCG
TACGTTGAAG AACTGTACGA TGCATACCTC AACAATCCGG CATCGGTGCC GGAGAACTGG
CGAGAGTATT TCGACGCGCT GCAGAACGTG CCTGCAACCG ACGGCTCGAC CGCCAATGAC
GTCGCTCATT TTCCGATCGT CGAATCGTTC GCCGAGCGTG CGAAGGCCAA TGCCTTCATC
CCGCGCGAAA GCACCAGCAA TCTGGCGACC GCGCGCAAGC AGGTGCACGT CCAGTCCCTC
ATCAGCGCCT ATCGCTTCCT CGGCTCGCAA TGGGCCAATC TGGATCCGCT GAAGCGTCGC
GAACGTCCCG CCATTCCCGA GCTCGAACCC GCGTTCTACG ACTTCTCCGA AGGCGACCTC
GACCAGACCT ACAGCGCAAG CAACCTGTAT TTCGGTTTCG ACCAGGCTTC GCTGCGCGAC
ATCGTCAAGG GCTTGCGTGA CACGTACTGC GGCACGATCG GCGCCGAGTA CATGTACATC
AGCGATCCTG AGCAGAAGCG CTGGTGGCAG GAGCGCCTGG AATCGACCCG CGCGACGCCG
GCCTTCTCGG CCGACAAGAA GAAGCACATC CTGAATCGCC TGACGGCAGC GGAAGGCCTG
GAGCGCTATC TGCACACCAA GTACGTCGGC CAGAAGCGCT TCTCGCTCGA AGGCGGCGAA
AGCTTTATCG CGGCGATGGA CGAAGTCGTC CAGCACGCAG GCAAGAGCGG CGTGCAGGAA
ATCATCATCG GCATGGCGCA CCGCGGGCGT CTGAACGTGC TGGTCAACAC GCTGGGCAAG
ATGCCGGCCG ACCTGTTCGC CGAATTCGAA GGCAAGCACG TCGACGACCT GCCGGCCGGC
GACGTGAAGT ATCACAAGGG CTTCTCGTCG GACGTGTCGA CCGAAGGCGG CCCGGTCCAC
CTGTCGCTCG CGTTCAACCC GTCGCACCTC GAAATCGTGA ACCCGGTGGT CGAAGGTTCC
GCGAAGGCGC GGATGGACCG TCGCGGCGAC GAAGACGGCC TGCAGGTGCT GCCGGTGCAG
ATCCACGGCG ACGCGGCCTT CGCCGGCCAG GGCGTCGTGA TGGAAACGCT GAACCTCGCG
CAGACGCGCG GTTACGGCAC GCACGGCACG CTGCACATCG TCATCAACAA CCAGATCGGC
TTCACGACGT CCGACCCGCG CGACGCGCGC TCGACGCTGT ACTGTACCGA CGTGGTCAAG
ATGATCGAGG CGCCGGTGCT GCACGTGAAC GGCGATGATC CGGAAGCCGT CGTGCTCGCG
ATCCAGATCG CGATCGACTA CCGGATGCAG TTCCACAAGG ATGTCGTGAT CGACATCGTC
TGCTTCCGCA AGCTGGGTCA CAACGAGCAG GACACGCCGG CGGTCACGCA GCCGCTGATG
TACAAGAAGA TCGCGCAGCA CCCGGGCACC CGTGCGCTGT ACGCCGAGAA GCTCGTGCAG
CAGGGCGTGA TCACCGCGGA AGACGCCGAC AACTACGTGA AGGCGTACCG CAAGGCGATG
GACGACGGCC ACCACACCGT CGATCCGGTC CTGTCGAACT ACAAGAGCAA GTACGCGGTC
GACTGGGTTC CGTTCCTGAA CCGCAAGTGG ACGGACGCAG CCGATACGGC CGTGCCGCTC
GCCGAACTGA AGCGCCTCGG CGAACGCATC ACGACGGTCC CGGAAAACTT CAAGGTTCAC
CCGCTCGTCG AGCGCGTGAT CAACGACCGC CGCAACATGG CGCGCGGCGA CCAGCCGCTC
GACTGGGGCA TGGGCGAACA CCTCGCATTC GCGTCGCTCG TCGCATCGGG CTACTCGGTG
CGCCTGACGG GCCAGGACTC GGGCCGCGGT ACGTTCACGC ACCGTCACGC GGTGCTGCAC
GACCAGAACC GCGAGCGCTG GAACGACGGC ACGTACGTGC CGCTGCAGAA CATCGCCGAA
GGTCAGGCGA AGTTCACGGT GATCGACTCG GTGCTGTCGG AAGAAGCGGT GCTGGGCTTC
GAATACGGTT ACTCGACCGC CGAGCCGAAC ACGCTCGTGC TGTGGGAAGC CCAGTTCGGC
GACTTCGTCA ACGGTGCGCA GGTCGTGATC GACCAGTTCA TTTCGTCGGG TGAAGTGAAG
TGGGGCCGCG TGTCGGGTCT CACGATGCTG CTGCCGCACG GCTACGAAGG CCAGGGTCCG
GAACACTCGT CGACCCGTAT CGAGCGTTTC CTGCAACTGT GTGCCGATCA CAACATGCAG
GTCGTTCAGC CGACGACGCC GGCGCAGATT TTCCACCTGC TGCGTCGCCA GATGATCCGC
CTGTTCCGCA AGCCGCTGAT CGTCGCCACG CCGAAGTCGC TGCTGCGCCA CAAGGAAGCG
GTGTCGGATC TGTCGGAACT CGCGAAGGGT TCGTTCCAGC CGGTGCTGGG CGAAACCGAC
GGCGGCATCG ACGCGAAGAA GGTCAAGCGC GTGCTGGCAT GCTCGGGCCG CGTGTATTAC
GACCTCGTCG CACATCGCCG CGAAGCGAAG GCGAACGACG TCGCGATCAT CCGTATCGAG
CAGCTGTATC CGTTCGCGCA CAAGCAGTTC GAAGCCGAAA TGAAGAAGTA CGAGAACGCG
ACTGAAGTGG TCTGGGTGCA GGACGAGCCG CAGAACCAGG GCCCTTGGTT CTACGTCGAG
CACCACCTGA AGGAAGGCAT GAAGGAAGGG CAGAAGCTGG CATACAGCGG CCGTCCGGCT
TCGGCCTCGC CGGCGGTTGG CTACTACGCG AAGCACTACG AGCAGCAGAA GGCACTGATC
GAAGGTGCGT TCGGCCGCCT GAAGAGCGCA TCGATCGCGA AATAA
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| Protein sequence | MSDVMKQFQL NSYLFGGNAS YVEELYDAYL NNPASVPENW REYFDALQNV PATDGSTAND
VAHFPIVESF AERAKANAFI PRESTSNLAT ARKQVHVQSL ISAYRFLGSQ WANLDPLKRR
ERPAIPELEP AFYDFSEGDL DQTYSASNLY FGFDQASLRD IVKGLRDTYC GTIGAEYMYI
SDPEQKRWWQ ERLESTRATP AFSADKKKHI LNRLTAAEGL ERYLHTKYVG QKRFSLEGGE
SFIAAMDEVV QHAGKSGVQE IIIGMAHRGR LNVLVNTLGK MPADLFAEFE GKHVDDLPAG
DVKYHKGFSS DVSTEGGPVH LSLAFNPSHL EIVNPVVEGS AKARMDRRGD EDGLQVLPVQ
IHGDAAFAGQ GVVMETLNLA QTRGYGTHGT LHIVINNQIG FTTSDPRDAR STLYCTDVVK
MIEAPVLHVN GDDPEAVVLA IQIAIDYRMQ FHKDVVIDIV CFRKLGHNEQ DTPAVTQPLM
YKKIAQHPGT RALYAEKLVQ QGVITAEDAD NYVKAYRKAM DDGHHTVDPV LSNYKSKYAV
DWVPFLNRKW TDAADTAVPL AELKRLGERI TTVPENFKVH PLVERVINDR RNMARGDQPL
DWGMGEHLAF ASLVASGYSV RLTGQDSGRG TFTHRHAVLH DQNRERWNDG TYVPLQNIAE
GQAKFTVIDS VLSEEAVLGF EYGYSTAEPN TLVLWEAQFG DFVNGAQVVI DQFISSGEVK
WGRVSGLTML LPHGYEGQGP EHSSTRIERF LQLCADHNMQ VVQPTTPAQI FHLLRRQMIR
LFRKPLIVAT PKSLLRHKEA VSDLSELAKG SFQPVLGETD GGIDAKKVKR VLACSGRVYY
DLVAHRREAK ANDVAIIRIE QLYPFAHKQF EAEMKKYENA TEVVWVQDEP QNQGPWFYVE
HHLKEGMKEG QKLAYSGRPA SASPAVGYYA KHYEQQKALI EGAFGRLKSA SIAK
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