| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1429 |
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| Symbol | |
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| ID | 6177053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1587132 |
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| End bp | 1588958 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681186 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001808133 |
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| Protein GI | 172060481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.329575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCCTTCGCAA TATCGCCATC ATCGCCCACG TCGACCACGG CAAGACCACG
CTCGTCGACC AACTGCTCCG CCAGTCCGGC ACCTTCCGCG AGAACCAGCA GATTGCCGAA
CGGGTGATGG ACTCGAACGA CATCGAAAAA GAGCGCGGGA TCACGATTCT CGCGAAGAAC
TGCGCGGTCG AATACGAAGG CACGCACATC AACATCGTCG ACACGCCGGG GCACGCGGAC
TTCGGCGGCG AAGTGGAGCG CGTGCTGTCG ATGGTCGACT CGGTGCTGCT GCTGGTCGAC
GCGGTCGAAG GCCCGATGCC GCAGACCCGC TTCGTCACGA AGAAGGCGCT CGCGCTCGGC
CTGAAGCCGA TCGTCATCGT CAACAAGATC GATCGTCCGG GTGCGCGGAT CGACTGGGTC
ATCAACCAGA CCTTCGACCT GTTCGACAAG CTGGGCGCGA CCGAAGAGCA GCTCGACTTC
CCGATCGTCT ACGCATCGGG CCTGAACGGC TATGCGTCGC TCGACCCGGC CGCGCGCGAG
GGCGACATGC GCCCGCTGTT CGAGGCGGTC CTCCAGCACG TGCCGGTCCG TCCGGCCGAT
CCGGACGCGC CGCTGCAGTT GCAGATCACG TCGCTCGACT ATTCGACGTA CGTCGGCCGG
ATCGGCGTCG GCCGCATCAC GCGCGGCCGC ATCAAGCCGG GTCAGCCGGT CGCGATGCGC
TTCGGCCCGG AAGGCGATGT GCTGAACCGC AAGATCAACC AGGTGCTGTC GTTCACGGGC
CTCGAGCGCG TGCAGGTCGA CTCCGCCGAA GCAGGCGACA TCGTGCTGAT CAACGGTATT
GAAGATGTCG GCATCGGCGC GACGATCTGC GCGGTGGATA CGCCGGAAGC GCTGCCGATG
ATCACCGTCG ACGAGCCGAC GCTGACGATG AACTTCCTGG TCAACTCGTC GCCGCTGGCC
GGTCGCGAAG GCAAGTTCGT CACGAGCCGC CAGATCCGCG ATCGCCTGAT GAAGGAACTG
AACCACAACG TCGCGCTGCG CGTGAAGGAC ACGGGCGACG AAACGGTGTT CGAAGTGTCG
GGCCGCGGCG AACTGCACCT GACGATTCTC GTCGAAAACA TGCGCCGTGA AGGCTATGAG
CTGGCCGTGT CGCGTCCGCG CGTCGTGATG CAGGAAATCG ACGGCGTGCG CCACGAGCCG
TACGAGTTGC TGACCGTCGA CGTCGAAGAC GAGCACCAGG GCGGCGTGAT GGAAGAGCTT
GGCCGCCGCA AGGGCGAAAT GCTCGACATG GCGTCGGACG GCCGCGGCCG CACGCGTCTG
GAATACAAGA TCTCGGCGCG CGGCCTGATC GGCTTCCAGA GCGAATTCCT GACGCTCACG
CGCGGCACGG GCCTGATGAG CCACATCTTC GACTCGTACG CACCGGTCAA GGACGGCTCG
GTCTTCGAGC GCCGCAACGG CGTGCTGATC TCGCAAGACG ACGGCGCGGC AGTGGCATAC
GCACTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGA AGCCGGGCGA CGCGCTGTAT
GAGGGCATGA TCATCGGCAT CCACAGCCGC GACAACGACC TCGTCGTGAA CCCGATCAAG
GGCAAGCAGC TGACCAACGT GCGTGCGTCG GGTACCGACG AAGCCGTGCG TCTCGTGCCG
CCGGTCCAGA TGTCGCTCGA ATACGCGGTC GAATTCATCG ACGACGACGA GCTCGTCGAA
GTGACGCCGC AGTCGATCCG CCTGCGCAAG CGCTTCCTGA AGGAGCACGA GCGTCGCCGC
GCGAGCCGCG AAGGCGCGGT CGACTAA
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| Protein sequence | MTRALRNIAI IAHVDHGKTT LVDQLLRQSG TFRENQQIAE RVMDSNDIEK ERGITILAKN
CAVEYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG
LKPIVIVNKI DRPGARIDWV INQTFDLFDK LGATEEQLDF PIVYASGLNG YASLDPAARE
GDMRPLFEAV LQHVPVRPAD PDAPLQLQIT SLDYSTYVGR IGVGRITRGR IKPGQPVAMR
FGPEGDVLNR KINQVLSFTG LERVQVDSAE AGDIVLINGI EDVGIGATIC AVDTPEALPM
ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKD TGDETVFEVS
GRGELHLTIL VENMRREGYE LAVSRPRVVM QEIDGVRHEP YELLTVDVED EHQGGVMEEL
GRRKGEMLDM ASDGRGRTRL EYKISARGLI GFQSEFLTLT RGTGLMSHIF DSYAPVKDGS
VFERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVKPGDALY EGMIIGIHSR DNDLVVNPIK
GKQLTNVRAS GTDEAVRLVP PVQMSLEYAV EFIDDDELVE VTPQSIRLRK RFLKEHERRR
ASREGAVD
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