Gene BamMC406_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1428 
Symbol 
ID6177160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1586315 
End bp1586809 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID641681185 
ProductMarR family transcriptional regulator 
Protein accessionYP_001808132 
Protein GI172060480 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.256408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT CTCCTTCCCA ACCGCCTGTT TCGCCGCTGT CCACGTATCA GATGAACGAC 
AGCGTCGGTT ATCTGATGTC GCGCGTGAAA TCGGTGATGA CCAACCTCGT CACGCAACGC
ACGCAGGAAG AGCTCGGCAT CACCGGCACG CAGGCGAGCA TGCTGTTCAT GATCGCGGTC
GGCAAGTGCT CGACGGCCGC CGAACTCGCG CGGGAATACG GGATCGACGC GAGCGCGGTC
ACGCGCCTGC TCGATCGCGT CGAGAAGCGC GGGCTGCTGT CCCGCGTGCG CAGCATCGAG
GATCGGCGGG TCGTTCGGCT CGAGCTGACC GACGAAGGCC GGGCGCTTGC CGAGCGGCTG
CCGCCGGTGT TCCGCAGCGT GCTCGACGAG CTGCTCGGCG GATTTACGCC GGAAGAAGTC
GGGTTCCTCA AGAGCATGCT GCGCCGCATT CTCAGCAACT ATTGCGAGAA CGCCGGCGGT
GGCACCCCGC AATAG
 
Protein sequence
MSDSPSQPPV SPLSTYQMND SVGYLMSRVK SVMTNLVTQR TQEELGITGT QASMLFMIAV 
GKCSTAAELA REYGIDASAV TRLLDRVEKR GLLSRVRSIE DRRVVRLELT DEGRALAERL
PPVFRSVLDE LLGGFTPEEV GFLKSMLRRI LSNYCENAGG GTPQ