| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1424 |
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| Symbol | truB |
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| ID | 6176529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1580848 |
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| End bp | 1581780 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681181 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001808128 |
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| Protein GI | 172060476 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0157045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG CAGCCCCCCA GCGTCCGCGC GTGCCCCGGC GCGCACTGGA CGGCGTCCTC
CTGCTCGACA AGCCGGTCGG CCTGTCGAGC AACGACGCCC TGATTCGCGC GAAGCGCCTG
CTTCTCGCGA AGAAAGCCGG TCACACCGGC ACGCTAGATC CGCTGGCCTC GGGCCTGTTG
CCGCTGTGCT TCGGCGAGGC GACGAAGTTC TCGCAGGATT TGCTGGAAGC GGACAAGACC
TACGAAGCGA CGATGCGTCT CGGCGTGCGC ACAACCACCG GCGACGCGGA AGGCGACGTG
CTCGACACAC GCGCGGTCGA ATGCGACCGC GCGGCGGTGG AAGCCGCACT CGTGCGCTTT
ACTGGCGAGA TCGTGCAGGT GCCGCCGATG TATTCGGCGC TCAAGCGCGA CGGCAAGCCG
CTGTACGAAT ATGCGCGCGC GGGCCAGACC GTCGAACGGG AAGGCCGCAA CGTGACGATT
CATGTACTCG ACCTGCTGGC CTGCGAGCTG CCGGACGTGA CGTTTCGCGT GACCTGCAGC
AAGGGCACGT ATGTGCGTAC GCTGGCCGAA GATATCGGCG AAGCGCTCGG TTGCGGCGCG
CATCTGACGA TGTTGCGTCG TACGGGTGTC GGTGCGCTGA CGCTCGAGCA TGCGGTGACG
CTCGACGCGC TGTCCGACGC CAACGAAGCG GCGCGCGATG CGTGGCTTCA GCCGGTCGAC
GCGCTGCTGT CGACGTTTCC GCTGGTGCGT CTCGACGAAG CCGGCGCGAA GCGGTTCCTG
CATGGTCAGC GCTTGCCGCT GTCGGCGCTC GATCCGATCG ATGCGGCGGA GGGCGAGCGT
GTGCGCGTGT ACGATGCGGC ACGGCTGCTC GGCGTGGCGC GCAAGGCCAA CGGCGTGCTC
GCACCCGAAC GCCTGGTCGT GACGGCTGCG TGA
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| Protein sequence | MTNAAPQRPR VPRRALDGVL LLDKPVGLSS NDALIRAKRL LLAKKAGHTG TLDPLASGLL
PLCFGEATKF SQDLLEADKT YEATMRLGVR TTTGDAEGDV LDTRAVECDR AAVEAALVRF
TGEIVQVPPM YSALKRDGKP LYEYARAGQT VEREGRNVTI HVLDLLACEL PDVTFRVTCS
KGTYVRTLAE DIGEALGCGA HLTMLRRTGV GALTLEHAVT LDALSDANEA ARDAWLQPVD
ALLSTFPLVR LDEAGAKRFL HGQRLPLSAL DPIDAAEGER VRVYDAARLL GVARKANGVL
APERLVVTAA
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