| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1421 |
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| Symbol | nusA |
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| ID | 6177455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1575836 |
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| End bp | 1577311 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641681178 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001808125 |
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| Protein GI | 172060473 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0329519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG AAGTGTTGAT GCTGGTGGAT GCGCTGGCGC GCGAGAAAAA CGTCGACAAG
GATGTGGTGC TGGGCGCCCT CGAGGCTGCG CTTGCGTCCG CTTCCAAGAA GCTGTTCGAC
GAAGGCGCCG AAATCCGCGT CCATATCGAT CGCGAAAGCG GCGAGCACGA AACCTTCCGT
CGCTGGCTCG TCGTCCCTGA CGAGGCAGGC TTGCAGGAGC CGGATCGCGA GATCCTGCTG
TTCGAAGCGC GTGAGCAGAA CCCGGACGTC GAAGTCGGCG AATTCGTCGA GGAGCCGGTG
CCGTCGATCG AGTTCGGCCG TATCGGCGCG CAGGCCGCCA AGCAGGTGAT CCTGCAGAAG
GTGCGCGATG CCGAGCGCGA GCAGATCCTG AACGACTACC TCGAGCGCGG CGAAAAGATC
ATGACGGGCA CAGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGCGTC
GAAGCGCTGC TGCGCCGCGA CCAGCTGATT CCGAAGGAAA ACCTGCGCGT GGGCGACCGC
GTGCGTGCGT ACATCGCGAA GGTCGACCGC ACCGCGCGTG GTCCGCAGAT CGAACTCTCG
CGCACGGCGC CCGAGTTCCT GATGAAGCTG TTCGAGATGG AAGTGCCGGA AATCGAGCAG
GGCCTGCTAG AGATCAAGGC AGCCGCTCGC GATCCGGGCG TGCGCGCGAA GATCGGCGTG
ATCGCCTACG ACAAGCGGAT CGATCCGATC GGTACCTGCG TCGGCATCCG CGGCTCCCGC
GTGCAGGCCG TGCGCAACGA GCTTGGTGGC GAAAACATCG ACATCGTGCT ATGGTCCGAG
GATCCCGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCAG CCGTCCAATC GATCGTCGTC
GATGAAGAAA AGCACTCGAT GGACGTCGTC GTCGACGAGA ACGAGCTGGC TGTCGCGATC
GGGCGCAGCG GTCAGAACGT TCGCCTTGCC GGCGAACTGA CCGGCTGGCA GATCAACATC
ATGACGCCGG ACGAATCCGC CCTGAAGCAG GGTGAAGAGC GCGATCGACT GCGTGCGCTC
TTCATGGCGC GTCTCGACGT CGACGAAGAA GTTGCCGATA TCCTGATCGA CGAAGGCTTC
ACGAGCCTCG AAGAGATCGC TTACGTGCCG CTCAACGAAA TGCTCGAAAT CGAGGCGTTC
GACGAGGACA CCGTGCACGA GCTGCGCAAC CGCGCACGCG ACGCACTGTT GACGATGGCG
ATCGCCAACG AAGAAAAGGT CGAAAACGCA GCGCTGGATT TGAAGGGCCT CGACGGCGTG
ACGCCGGAGT TGCTCGCAAA GCTGGCCGAA CACGGCATGC AGACGCGGGA CGATCTCGCC
GAGCTGGCTG TGGATGAACT GGTCGACATG ACCGGGATGG AAGAGGATGC CGCTAAGGCG
TTGATCATGA AAGCACGTGA ACACTGGTTC CAGTGA
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| Protein sequence | MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR
RWLVVPDEAG LQEPDREILL FEAREQNPDV EVGEFVEEPV PSIEFGRIGA QAAKQVILQK
VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR
VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV
IAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV
DEEKHSMDVV VDENELAVAI GRSGQNVRLA GELTGWQINI MTPDESALKQ GEERDRLRAL
FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RARDALLTMA
IANEEKVENA ALDLKGLDGV TPELLAKLAE HGMQTRDDLA ELAVDELVDM TGMEEDAAKA
LIMKAREHWF Q
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