Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1416 |
Symbol | |
ID | 6176819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1569721 |
End bp | 1570623 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681173 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001808120 |
Protein GI | 172060468 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.691659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTAA CGCTGCGCCA GCTTCGCGTG TTCATCGAGG TAGCGCGGCT CAGGAGCTTC AGCCGCGCGG GCGACGAGAT CGGACTCACG CAGTCGGCGG TGAGCCGTTG TGTGCGTGAG CTCGAGACCG AACTCGGGCT GAAACTGATC GACCGGACGA CGCGCGACGT GCAGTTGACC GATGTCGGAG CAAACCTGAT CGCGAGCGTG TCCCGCCTGA TCGACGATCT CGACGACACG CTGCGCGAGA TTCGCGAGAT CGGCGAGCAG CGGCGGGGGC GCGTGATCGT CGCCGCGAGC CCGACGATCG CGTGCCGGCT GATGCCGCGC GTTGTCGCGT CGTGCGAGCG CCAGTTCCCG TTCGTCACGC TTGGCTTGCG CGACGACGTG CAGAGCGACG TACTGCGCAA GGTGAAGTCG AGCGAGGTCG ATTTTGGCGT CGTCATCGGC CCGCTTACCG TGGCCGATCT CGTGTGCGAA CCGTTGATGA CCGATTCGTT CTGCCTGGTC GCGCGCGCCG ATCATCCGCT TGCGGCGCGG CCCGAGGTGC CGTGGACGGC ACTCGACGGC GAGCGCCTCG TGCTGCTCGA CCATGCGTCC GGAAGCCGGC CGCTGATCGA CGCTGCGCTG GCCACCCATC GGGTGAACGC GACGGTCATG CAGGAACTCG GGCATTCGGC GACGGTATTC GGGCTCGTCG AGGCCGGCGT CGGCGTGAGC GTGCAGCCGT GGCTGTCGCT GCCGCTGCCG GCAGGATCGA CGCTGGTCGC GCGGCCGCTG ACGCCGCGTA CCGAGCGCAC CGTCGAGCTG GTGCGCCGCC GCGACCGGTC GCTGTCGCCC GCCGCGCAGG CGATCTGGGA GCTCGCGCGC CAGATGCCGG CGCGGGCGGA GGACCTCGAC TGA
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Protein sequence | MNVTLRQLRV FIEVARLRSF SRAGDEIGLT QSAVSRCVRE LETELGLKLI DRTTRDVQLT DVGANLIASV SRLIDDLDDT LREIREIGEQ RRGRVIVAAS PTIACRLMPR VVASCERQFP FVTLGLRDDV QSDVLRKVKS SEVDFGVVIG PLTVADLVCE PLMTDSFCLV ARADHPLAAR PEVPWTALDG ERLVLLDHAS GSRPLIDAAL ATHRVNATVM QELGHSATVF GLVEAGVGVS VQPWLSLPLP AGSTLVARPL TPRTERTVEL VRRRDRSLSP AAQAIWELAR QMPARAEDLD
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