| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1397 |
|---|
| Symbol | |
|---|
| ID | 6176739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1549393 |
|---|
| End bp | 1549746 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681152 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001808101 |
|---|
| Protein GI | 172060449 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0150121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA TTCGTCACCA CGTCGGAGCC CGCCTCTCCG AAACCGCGAT CCACAACGGT
ACCGTGTATC TGGCTGGCCA GATCGCCGAA GACACCACCC AGGACATCAG GGGCCAGACG
CGCGAAGTGC TGGGCCACAT CGACCGCCTG CTCGCCGAAG CGAACAGCGA CAAGGCGCAT
CTGCTGTCGG TGCAGATCTA CATTTCGGAT CTCGCGAACT TCGAAGGCAT GAACGCGGAG
TGGGACGCGT GGGTCGCGCC GGGCAACACG CCGCCGCGCG CGACCGTCGA GGCGAAGCTC
GCGGATCCGG CGCTGCTGGT CGAGATCGTC GTCGTCGCCG CGCAGCGGAG CTGA
|
|---|
| Protein sequence | MAVIRHHVGA RLSETAIHNG TVYLAGQIAE DTTQDIRGQT REVLGHIDRL LAEANSDKAH
LLSVQIYISD LANFEGMNAE WDAWVAPGNT PPRATVEAKL ADPALLVEIV VVAAQRS
|
|---|
| |