| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1396 |
|---|
| Symbol | |
|---|
| ID | 6177454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1548415 |
|---|
| End bp | 1549311 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641681151 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001808100 |
|---|
| Protein GI | 172060448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.340628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCA CCTCAGCGAA TCCCCCGGTT CCCCGTCAGC GACGCGTGCA GTGTGCAAGC
GCCGCCGGCC TTCACCACGT CGCCTATACC GAATGGGGCG ACCCGGCCAA TCCGCGTGTG
CTGGTCTGCG TGCACGGCCT GACCCGTTCG GGGCGCGACT TCGACCGGCT CGCCGCCGCG
CTGTCCGATA CGTATCGCGT CGTCTGCCCC GACGTCGTCG GGCGCGGTCG CTCCGACTGG
CTCGCCGATC CGCGGCATTA CGCGATTCCG CAATACGTCG CCGACATGGT CACGCTGATC
GCGCGGCTCG ACGTCGAGTC GGTCGACTGG TTCGGCACGT CGATGGGCGG GCTGATCGGC
ATGGCGCTCG CGGGGCTGTC CGGTTCGCCG CTGCGCCGGA TGATCGTCAA CGACGTCGGC
CCACGCATCG AACCCGATTC GCTGACGCGC ATCGGCGAAT ACCTCGGCGT GCAGCCGCGC
TTCGCGACCG AGCAGGAAGG CGTCGACTAT CTGACGTCGC TGTCGCTGCC GTTCGGTGAG
TTGACCGCCG ATGAATGGCG CGGGATCAAC CGGCCGCTGC TGCGCGAGCT GCCCGACGGC
GGCTGGACGA TGCGCTACGA TCCGCGCATC GCCGAGCCGT TCAAGGCGAC GACACCTGAA
CTGGCCGCGC TCGGTGAAGC CGCGCTGTGG CGCGCGATCG AGACGACCGA TGCGTCGCTG
CTCGTCGTGC GCGGCGCCGA GTCGGACCTG TTGTCGCGCG AGACCGCGGC CGAGATGGTG
CGCCGCGGCC GGCATGTGGC GCAGGCGGAA ATTCCCGGCA CGGGGCACGC GCCGGCGTTC
CTGAACGCCG ACCAGATTGC GCTCGCGCGG CGGTTTTTCG TCGAAGGCGC CTCATAA
|
|---|
| Protein sequence | MPITSANPPV PRQRRVQCAS AAGLHHVAYT EWGDPANPRV LVCVHGLTRS GRDFDRLAAA
LSDTYRVVCP DVVGRGRSDW LADPRHYAIP QYVADMVTLI ARLDVESVDW FGTSMGGLIG
MALAGLSGSP LRRMIVNDVG PRIEPDSLTR IGEYLGVQPR FATEQEGVDY LTSLSLPFGE
LTADEWRGIN RPLLRELPDG GWTMRYDPRI AEPFKATTPE LAALGEAALW RAIETTDASL
LVVRGAESDL LSRETAAEMV RRGRHVAQAE IPGTGHAPAF LNADQIALAR RFFVEGAS
|
|---|
| |