| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1382 |
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| Symbol | |
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| ID | 6176655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1534827 |
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| End bp | 1535909 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681137 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001808086 |
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| Protein GI | 172060434 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.641116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACGC CTCCTTCCGG CGGCGGCGCG GCGCGCGCAC GCCGCGGCAG CGGCCGGTCG
GTGCTCGGCG ATGTCGCGAA ACTCGCCGGC GTGTCGACCG CGACCGTTTC GCGCGTGTAC
AACGATCCCG GCAAGGTATC GGCCGACGTA CAGCAGCGCG TGCGCGACGC CGCACGCGCG
CTGAACTGGA TTCCGAACGC CGCCGGCCGC GCACTCGCGT CCACGCGCAC CCACATCACG
GGCGCGATCA TCCCGACGCT CGACGACCAG GTGTTCGCGT CGCAGGTAGC CGGAATGCAG
GCGGTCATGG CCGAGCACGG CATCACCCTC TTTCTCGGCT GCTCGAATTA CGATCCGGCC
CAAGCGCTGG CACAGGTGCG CGCGATGCTG TCGCGCGGCG TGGAAGCCGT GTCGCTGGTC
GGTGAAGCGT ATCCGCCGGA GGTCTTCGAA CTGCTGCACC AGCATCGCGT GCCGTATGTC
GTGACCTATG CGTATCGCGA CGACAGCCCG CACTGCTGCA TCGGCTTCGA CAATCGCGCG
GCATTCGCAC GGCTGACCAC GCATCTGCTC GACCTCGGCC ATCGCGATTT CGCGATCATC
ATGCAGCCTT CCGCGGACAA CGACCGCGTG CAGGCCCGCC TGCGCGGCAT TCACGACACG
CTTGCCGCGC GTGGCCTCGC GGTGCGCCCG GTACACCAGC ACGAAGGCGC GGCAACGATC
GCGTTCGGGC GGGCGAGCCT GCGCGCGATT GCCGACAGCG GCGCGACGCG CCCGACAGCC
GTGATTTGCG GCAACGACGC TCTCGCGCTC GGCGCGCTGC TCGAGGCGCA CGCACTTGGG
CTGGACGTGC CGTCGCAATT GTCGATCACC GGCTTCGACG ACGTCGCGCT GGCGCGCGAA
ATCCGGCCGT CACTGACGAC GATGTGGGTC GACACCGCTG CGATCGGGCG CAAGGCCGCG
CACGCGTTGC TCGACGCGCT CGGGAACGGC GAAACCGGGC CCGGTTACGC GGTACAGCCG
GAACTGCGGG TGCGTGAATC GGCCGCGCCG CCACCGCTGG CGCGGGCACC GGCAGCCCAA
TGA
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| Protein sequence | MSTPPSGGGA ARARRGSGRS VLGDVAKLAG VSTATVSRVY NDPGKVSADV QQRVRDAARA
LNWIPNAAGR ALASTRTHIT GAIIPTLDDQ VFASQVAGMQ AVMAEHGITL FLGCSNYDPA
QALAQVRAML SRGVEAVSLV GEAYPPEVFE LLHQHRVPYV VTYAYRDDSP HCCIGFDNRA
AFARLTTHLL DLGHRDFAII MQPSADNDRV QARLRGIHDT LAARGLAVRP VHQHEGAATI
AFGRASLRAI ADSGATRPTA VICGNDALAL GALLEAHALG LDVPSQLSIT GFDDVALARE
IRPSLTTMWV DTAAIGRKAA HALLDALGNG ETGPGYAVQP ELRVRESAAP PPLARAPAAQ
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