Gene BamMC406_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1377 
Symbol 
ID6176492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1529102 
End bp1530433 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content68% 
IMG OID641681132 
Productribonuclease BN 
Protein accessionYP_001808081 
Protein GI172060429 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.763301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.704772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAAGT TGAGCGTCGA TCTCGACACC ATCAAGCGCC TCGCGCAGTT CGCGGCCCGG 
CGCAGCGCCG AGGATCGCAT CCCGCAAGTG GCGGGCAGCC TCACGTTCAC GACGATGCTG
GCACTCGTGC CGCTCGTGAC GGTCGCGTTC GCGCTGTTCA CCGCGTTCCC GATGTTCTCG
TCGTTCCAGA TCTCGCTGCA GGGGTTCCTC GCGGACCACC TGATGCCCGC GCAGTTCAAC
GTCCAGATCT TCAAGTACCT GAACCAGTTC GCCGCGAAAG CCAAGGGGCT GACGACGGCC
GGCCTGATCG TGCTCGTCGT CACGTCGGTG ATGACGATGA TGACGATCGA ATCCGCGTTC
AACCTGATCT GGCGCGTGCG CAAGCCGCGG CCGTTCGCGC AGCGCGTGCT CGCGTACTGG
GCGCTGATCA CGCTCGGCCC GCTGCTGTTC GGCGTGAGCC TGTCGATTTC GTCGTACCTG
TTTACGCAGT CGCTCGCGTT CACAGGCGCC GCGCCGTCGA CGTCGATCGT CGAGTGGCTG
CTCGCGCTCG TGTCGCTGCC GCTGACCGTG CTCGCGTTCA CGCTGCTGTA CGTGTACCTG
CCGAACTGCA CGGTCGCGTG GCGCGACGCG GTGATCGGCG GCCTGTTCGC GGCCATCGCG
TTCGAGCTCG CGAAGCGCGG CTTCGGCTAT TACGTGCGGC GCATTCCGAC CTATACGGCC
GTATACGGCG CGTTCGCGGC GCTACCGGTG TTCCTCCTGT GGGTGTATCT GAGCTGGTTC
ATCGCGCTGC TCGGCGCGAT GGTCGCGTCC GCGCTGCCGG CGATCCGCGT CGGCCAGTTC
CATCGCATCC ACTATCCGGG CAGCGACCTG CTCGACGCGC TCGAACTGCT CGCGCGGCTC
GCCGAGGCGC ATGAGGTCGG CAAGGCGGGC TATACGGCGA CGCGGCTCGC GACCATGTTG
CGCTGCGACA TGGAAACCGC GCAGCGGCTG CTGCTGACGA TGGAGGAGCG GGAATGGATC
GCGCGGCTGG ATGGCGGTGA AGTCGGGCCG CGCTACATCC TGCTGGCGAA CCCGGCGCGC
CTGACGCTCG CGCAGCTGTT CGACGTGCTG GTGATAGACC GCACGGAGCT GACCTACCAG
CTGCAGCGGC GCCGCAGCCA CGTCGATGGC GCGGCGTTGC TCGACGTGCT GACGAACGAC
CGGTTCGACG TATCGCTCGC GTCGCTGATC GCCGCGCACC GGCTCACAGG TGCGCAGCCG
GAGGAAAGCG TGCCCGGGCC GGTGCCCGGC GCGGCGCCCG ACCCGCACGC GCGGCCGCCG
AAAACGGCGT GA
 
Protein sequence
MPKLSVDLDT IKRLAQFAAR RSAEDRIPQV AGSLTFTTML ALVPLVTVAF ALFTAFPMFS 
SFQISLQGFL ADHLMPAQFN VQIFKYLNQF AAKAKGLTTA GLIVLVVTSV MTMMTIESAF
NLIWRVRKPR PFAQRVLAYW ALITLGPLLF GVSLSISSYL FTQSLAFTGA APSTSIVEWL
LALVSLPLTV LAFTLLYVYL PNCTVAWRDA VIGGLFAAIA FELAKRGFGY YVRRIPTYTA
VYGAFAALPV FLLWVYLSWF IALLGAMVAS ALPAIRVGQF HRIHYPGSDL LDALELLARL
AEAHEVGKAG YTATRLATML RCDMETAQRL LLTMEEREWI ARLDGGEVGP RYILLANPAR
LTLAQLFDVL VIDRTELTYQ LQRRRSHVDG AALLDVLTND RFDVSLASLI AAHRLTGAQP
EESVPGPVPG AAPDPHARPP KTA