Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1377 |
Symbol | |
ID | 6176492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1529102 |
End bp | 1530433 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681132 |
Product | ribonuclease BN |
Protein accession | YP_001808081 |
Protein GI | 172060429 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.763301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.704772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCGAAGT TGAGCGTCGA TCTCGACACC ATCAAGCGCC TCGCGCAGTT CGCGGCCCGG CGCAGCGCCG AGGATCGCAT CCCGCAAGTG GCGGGCAGCC TCACGTTCAC GACGATGCTG GCACTCGTGC CGCTCGTGAC GGTCGCGTTC GCGCTGTTCA CCGCGTTCCC GATGTTCTCG TCGTTCCAGA TCTCGCTGCA GGGGTTCCTC GCGGACCACC TGATGCCCGC GCAGTTCAAC GTCCAGATCT TCAAGTACCT GAACCAGTTC GCCGCGAAAG CCAAGGGGCT GACGACGGCC GGCCTGATCG TGCTCGTCGT CACGTCGGTG ATGACGATGA TGACGATCGA ATCCGCGTTC AACCTGATCT GGCGCGTGCG CAAGCCGCGG CCGTTCGCGC AGCGCGTGCT CGCGTACTGG GCGCTGATCA CGCTCGGCCC GCTGCTGTTC GGCGTGAGCC TGTCGATTTC GTCGTACCTG TTTACGCAGT CGCTCGCGTT CACAGGCGCC GCGCCGTCGA CGTCGATCGT CGAGTGGCTG CTCGCGCTCG TGTCGCTGCC GCTGACCGTG CTCGCGTTCA CGCTGCTGTA CGTGTACCTG CCGAACTGCA CGGTCGCGTG GCGCGACGCG GTGATCGGCG GCCTGTTCGC GGCCATCGCG TTCGAGCTCG CGAAGCGCGG CTTCGGCTAT TACGTGCGGC GCATTCCGAC CTATACGGCC GTATACGGCG CGTTCGCGGC GCTACCGGTG TTCCTCCTGT GGGTGTATCT GAGCTGGTTC ATCGCGCTGC TCGGCGCGAT GGTCGCGTCC GCGCTGCCGG CGATCCGCGT CGGCCAGTTC CATCGCATCC ACTATCCGGG CAGCGACCTG CTCGACGCGC TCGAACTGCT CGCGCGGCTC GCCGAGGCGC ATGAGGTCGG CAAGGCGGGC TATACGGCGA CGCGGCTCGC GACCATGTTG CGCTGCGACA TGGAAACCGC GCAGCGGCTG CTGCTGACGA TGGAGGAGCG GGAATGGATC GCGCGGCTGG ATGGCGGTGA AGTCGGGCCG CGCTACATCC TGCTGGCGAA CCCGGCGCGC CTGACGCTCG CGCAGCTGTT CGACGTGCTG GTGATAGACC GCACGGAGCT GACCTACCAG CTGCAGCGGC GCCGCAGCCA CGTCGATGGC GCGGCGTTGC TCGACGTGCT GACGAACGAC CGGTTCGACG TATCGCTCGC GTCGCTGATC GCCGCGCACC GGCTCACAGG TGCGCAGCCG GAGGAAAGCG TGCCCGGGCC GGTGCCCGGC GCGGCGCCCG ACCCGCACGC GCGGCCGCCG AAAACGGCGT GA
|
Protein sequence | MPKLSVDLDT IKRLAQFAAR RSAEDRIPQV AGSLTFTTML ALVPLVTVAF ALFTAFPMFS SFQISLQGFL ADHLMPAQFN VQIFKYLNQF AAKAKGLTTA GLIVLVVTSV MTMMTIESAF NLIWRVRKPR PFAQRVLAYW ALITLGPLLF GVSLSISSYL FTQSLAFTGA APSTSIVEWL LALVSLPLTV LAFTLLYVYL PNCTVAWRDA VIGGLFAAIA FELAKRGFGY YVRRIPTYTA VYGAFAALPV FLLWVYLSWF IALLGAMVAS ALPAIRVGQF HRIHYPGSDL LDALELLARL AEAHEVGKAG YTATRLATML RCDMETAQRL LLTMEEREWI ARLDGGEVGP RYILLANPAR LTLAQLFDVL VIDRTELTYQ LQRRRSHVDG AALLDVLTND RFDVSLASLI AAHRLTGAQP EESVPGPVPG AAPDPHARPP KTA
|
| |