| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1370 |
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| Symbol | |
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| ID | 6177346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1522607 |
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| End bp | 1524154 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641681125 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001808074 |
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| Protein GI | 172060422 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT GCGCGAGCAT GGGCGACAAC AAGCCCAAGT CCACCCGCAT CGAAGCGAAC
GCGCTCGACG CCGGCGCGGC CATCCGCGCG GCCAACCGCG ACGCGGGCTG GCCCGCGTCC
GACTGGTGGC GCGCGTACCG CGACCCGCAG CTCGACGCGT GGATCGCCGC CGCCCAGGCC
GGCAACCCGA CCCTCGCGGC GGCCGAGGCC CGCGTGCGCG AAGCGCAGGC GATGGCGCGC
GTGGCCCGGT CGGCGGAACT GCCGCAGATC AACGGCAACC TGTCGCTGAT GCGCCAGCAC
TGGCCCGACA ACGTCTACTA CGGCCCGGGG CCGCTCGCCG ACACCGACAC GTGGAACAAC
ACCGGCACGC TCGGCCTGTC GTATCACCTC GACCTGTGGG GCAAGGACAA GAACGCGACC
GAGCGCGCGC TCGACACCGC GCATGCAACC GCGGCCGACG CACGAGCCGC GAAGCTCGAG
CTGGAGGTCA ACGTGGTGCG CGCGTATGTC GGCATGTCGA TGAACTACGC GCTGCTCGAC
CTCGCGCACG AGACATTCGA ACGCCAGCGC GCGCTGGCCG ATCTCGCGCG CAAGCGTCTG
CAGGCCGGGA TTGGCACGCA GCTCGAAGTC AGCCAGGCCG AATCGACGCT GCCCGACTAC
GAGCGCCAGA TCGACAGCTA CGAAGAAGCC ATCCAGCTCG CGCGCCATCA GCTCGCCGCG
CTCGCGGGCA AGGGCCCGGG CGCCGGCGAC GCGATCAAGC GGCCGAGCCT CGCGCTCGAC
GCGCCGGCCG GCCTGCCGTC CGCGATGCCG GCCGACCTGC TCGGCCGCCG CCCGGATGTC
GTCGCGGCCC GCTGGACGGT CGACGCGCAA GCCCGCGGCA TCGATGTCGC GAAGGCCGCG
TTCTACCCGA ACATCGACCT GCTCGCGACG GTCGGCGGCT TCGGCGTGAC CGCGCCGTTC
ACCGACTTCC TGCGCGCGAT GAACGGCGGC TGGACGGCCG GCCCCGCGCT GTCGCTGCCG
ATCTTCGAAG GCGGCCGCCT GCGCGCGCAA CTCGGTGCGG CCGATGCCGG CTACGACCAG
GCGGTCGAGC GTTACAACCA GACGGTCGTC GGCGCGCTGA AGGACATCGC CGACCAGGTC
GTGCGGATCC GCTCGCTCGA TACGCAGAAG AAGGACGCCG CGCGCTCGGT GGCCGCCAAC
GACCGCAGCT ACCAGCTGTC GCGCGAAGGC TTCCGCCGCG GGCTGACCGA TTACGTGAAC
GTGCTGATCG CGCAACAGCA GCTGCTGCGC GCGCAGGAGA CGGCGGCCCG CATCGACGCG
GAACGCCTCG CCGCGCACGC GCAGCTGATG GCCGCGCTCG GCGGCGGCGT CGAAACGGGC
GAGGACGGAC GGGACGGCCA TCCGTCGGGC GGCCATTCGT CGCACGACGA ATCCGCCACG
GGTGCCGCCG CGCCGGCGGC CGCATCGGGT GCGAAGCCCG TCGCGGCCAT CGCCCGGCCC
GCGCAGGTCG CGACGGCCGG TGCGAGCGCC ACGCCGGCCG CACGGTAA
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| Protein sequence | MTGCASMGDN KPKSTRIEAN ALDAGAAIRA ANRDAGWPAS DWWRAYRDPQ LDAWIAAAQA
GNPTLAAAEA RVREAQAMAR VARSAELPQI NGNLSLMRQH WPDNVYYGPG PLADTDTWNN
TGTLGLSYHL DLWGKDKNAT ERALDTAHAT AADARAAKLE LEVNVVRAYV GMSMNYALLD
LAHETFERQR ALADLARKRL QAGIGTQLEV SQAESTLPDY ERQIDSYEEA IQLARHQLAA
LAGKGPGAGD AIKRPSLALD APAGLPSAMP ADLLGRRPDV VAARWTVDAQ ARGIDVAKAA
FYPNIDLLAT VGGFGVTAPF TDFLRAMNGG WTAGPALSLP IFEGGRLRAQ LGAADAGYDQ
AVERYNQTVV GALKDIADQV VRIRSLDTQK KDAARSVAAN DRSYQLSREG FRRGLTDYVN
VLIAQQQLLR AQETAARIDA ERLAAHAQLM AALGGGVETG EDGRDGHPSG GHSSHDESAT
GAAAPAAASG AKPVAAIARP AQVATAGASA TPAAR
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