| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1367 |
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| Symbol | |
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| ID | 6177482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1519299 |
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| End bp | 1520177 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681122 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001808071 |
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| Protein GI | 172060419 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.455024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.947331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCA GAAAACTCTT CGGCTTCGTC GCGACCGCCG TCATCCTTCT CGTCGCGATC
CTGATCGGGC GCTCGCTGTG GGTGCACTAC ATGGACGATC CCTGGACCCG CGACGGGCGC
GTGCGCGCCG AGATCGTCAA CGTCGCGCCG GACGTGTCGG GCGCGATCGT CGAGCTGCCC
GTGCATGACA ACCAGCTCGT GAAAAAGGGC GACCTGATCA TGCAGATCGA CCCGTCGCAC
TACCAGATCG CGGTCGAGCA GGCCCAGGCG GCCGTCGCCG CCCGCCGCGC GGAACTGCAG
ATGCGCCGCG ACGACGCGGC CCGTCGCGCC GACCTCGACG CGCTCGTCGT GTCGAAGGAA
AACCGCGAGA ACGCGGCGCA CAGCGCGTCG AGCGCCGACG CGCAGTACCA GCAGGCGATC
GCCGCGCTCG ACGCCGCGAA GCTCAATCTC GAACGCACGC GCGTGGTCGC GCCGGTCGAC
GGCTACGTGA CGAACCTGCA GACGTTCAAG GGCAACTACG CGGTAGCCGG CCAGGCGAAG
CTCGCGATCG TCGACAGCCA CTCGTTCTGG GTCTACGGCT ACTTCGAGGA AACCAAGCTG
CCGCGCGTGA AGATCGGCGC GCCCGCCGAG ATGCGGCTGA TGAGCGGCGG CGTGATGAAA
GGCCACGTCG AGAGCATCTC GCGCGGCATC TACGATCGCG ACAACCCGCA AAGCCGCGAC
CTCGTCGCGG ACGTGAACCC GACCTTCAAC TGGGTGCGCC TCGCGCAGCG CGTGCCGGTC
CGCATCCGGA TCGACGAAGT GCCGGCCGAC GTGGTGCTGT CGGCGGGCAC GACCTGCACG
GTCATCATCG ACCCGGACCA GCAGAAGAAG AAGTCGTAA
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| Protein sequence | MMLRKLFGFV ATAVILLVAI LIGRSLWVHY MDDPWTRDGR VRAEIVNVAP DVSGAIVELP
VHDNQLVKKG DLIMQIDPSH YQIAVEQAQA AVAARRAELQ MRRDDAARRA DLDALVVSKE
NRENAAHSAS SADAQYQQAI AALDAAKLNL ERTRVVAPVD GYVTNLQTFK GNYAVAGQAK
LAIVDSHSFW VYGYFEETKL PRVKIGAPAE MRLMSGGVMK GHVESISRGI YDRDNPQSRD
LVADVNPTFN WVRLAQRVPV RIRIDEVPAD VVLSAGTTCT VIIDPDQQKK KS
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