Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1365 |
Symbol | |
ID | 6179114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1515971 |
End bp | 1517209 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641681120 |
Product | major facilitator transporter |
Protein accession | YP_001808069 |
Protein GI | 172060417 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.399503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACAA GCCTCGATAC GGGTGCCGGC AACGCCGCCG CAGCCCAGCC GTCTGCTCCA CCCGCCGCGC GCACCGTCTA CCCGGTGCTC GGCGCGATCA GCTTCTCGCA CATGCTCAAC GACATGATCC AGTCGTTGAT CCTCGCGATC TATCCGATGC TCAAGAGCCA GTTCGCGCTG TCGTTCGCGC AGATCGGCCT GATCACGCTG ACCTACCAGA TCACCGCATC GCTGCTGCAG CCGCTCATCG GGCTCTATAC GGACAAGCGG CCCAAGCCCT ATTCGCTGCC GGTCGGGATG GGCTTCACGC TCGCGGGGCT GCTGCTGATG TCGGCCGCGC AGAACTTCCC GACGCTGCTG GCGGCGGCGG CCCTGGTCGG CTGCGGCTCG TCGGTGTTCC ATCCGGAATC GTCGCGGGTC GCGCGGATGG CGTCGGGGGG CCAGCACGGG CTCGCGCAGT CGCTGTTCCA GGTCGGCGGC AACGCCGGCT CGGCGCTCGG GCCGCTGCTC GCCGCGCTGG TGATCATTCC GCACGGCCAG CACAGCATCG CGTGGTTCTC GGCGGCCGCG CTCGTCGCGA TGGTCGTGCT CACGCAGATC GGCCACTGGT ACAAGAAGCA TCCGTCGATG AAGAAGAAGG CCGCGGCGGC CGGCCATCCG ACGCTGTCGC CGCGCCGCGT GCTCGCCGCG ATCGGCGTGC TGGTGCTGCT GGTGTTCTCG AAGTACTTCT ATCTCGCGAG CATCAACAGC TATTTCACGT TCTATCTGAT CGACAAGTTC CACCTGTCGG TGCAGGCCGC GCAGATCCAC CTGTTCGTGT TCCTCGCGGC CGTGGCGGCC GGCACGCTGA TCGGCGGGCC GGTCGGCGAC CGGATCGGCC GCAAGTACGT GATCTGGGTG TCGATCCTCG GCGTCGCGCC GTTCACGCTG CTGCTGCCGT ACGCGAACCT GTTCTGGACG AGCGTGCTGA GCGTGATCAT CGGCATCGTG CTGGCGTCGG CGTTCGCCGC GATCCTCGTC TATGCGACGG AGCTGATGCC GGGCAAGGTC GGGATGGTCG CAGGCCTGTT CTTCGGCTTC GCGTTCGGCC TGGGCGGCGT GGGCGCCGCC GTGCTGGGCC AGCTCGCGGA CGCGACGAGC ATCACGTTCG TCTACAAGGT GTGCTCGTTC CTGCCGCTGA TCGGCGTGCT GACGGTGTTC CTGCCGAACC TCGAAAGCGC GCGCCGCAAG AAGGCGTGA
|
Protein sequence | METSLDTGAG NAAAAQPSAP PAARTVYPVL GAISFSHMLN DMIQSLILAI YPMLKSQFAL SFAQIGLITL TYQITASLLQ PLIGLYTDKR PKPYSLPVGM GFTLAGLLLM SAAQNFPTLL AAAALVGCGS SVFHPESSRV ARMASGGQHG LAQSLFQVGG NAGSALGPLL AALVIIPHGQ HSIAWFSAAA LVAMVVLTQI GHWYKKHPSM KKKAAAAGHP TLSPRRVLAA IGVLVLLVFS KYFYLASINS YFTFYLIDKF HLSVQAAQIH LFVFLAAVAA GTLIGGPVGD RIGRKYVIWV SILGVAPFTL LLPYANLFWT SVLSVIIGIV LASAFAAILV YATELMPGKV GMVAGLFFGF AFGLGGVGAA VLGQLADATS ITFVYKVCSF LPLIGVLTVF LPNLESARRK KA
|
| |