Gene BamMC406_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1365 
Symbol 
ID6179114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1515971 
End bp1517209 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID641681120 
Productmajor facilitator transporter 
Protein accessionYP_001808069 
Protein GI172060417 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.399503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA GCCTCGATAC GGGTGCCGGC AACGCCGCCG CAGCCCAGCC GTCTGCTCCA 
CCCGCCGCGC GCACCGTCTA CCCGGTGCTC GGCGCGATCA GCTTCTCGCA CATGCTCAAC
GACATGATCC AGTCGTTGAT CCTCGCGATC TATCCGATGC TCAAGAGCCA GTTCGCGCTG
TCGTTCGCGC AGATCGGCCT GATCACGCTG ACCTACCAGA TCACCGCATC GCTGCTGCAG
CCGCTCATCG GGCTCTATAC GGACAAGCGG CCCAAGCCCT ATTCGCTGCC GGTCGGGATG
GGCTTCACGC TCGCGGGGCT GCTGCTGATG TCGGCCGCGC AGAACTTCCC GACGCTGCTG
GCGGCGGCGG CCCTGGTCGG CTGCGGCTCG TCGGTGTTCC ATCCGGAATC GTCGCGGGTC
GCGCGGATGG CGTCGGGGGG CCAGCACGGG CTCGCGCAGT CGCTGTTCCA GGTCGGCGGC
AACGCCGGCT CGGCGCTCGG GCCGCTGCTC GCCGCGCTGG TGATCATTCC GCACGGCCAG
CACAGCATCG CGTGGTTCTC GGCGGCCGCG CTCGTCGCGA TGGTCGTGCT CACGCAGATC
GGCCACTGGT ACAAGAAGCA TCCGTCGATG AAGAAGAAGG CCGCGGCGGC CGGCCATCCG
ACGCTGTCGC CGCGCCGCGT GCTCGCCGCG ATCGGCGTGC TGGTGCTGCT GGTGTTCTCG
AAGTACTTCT ATCTCGCGAG CATCAACAGC TATTTCACGT TCTATCTGAT CGACAAGTTC
CACCTGTCGG TGCAGGCCGC GCAGATCCAC CTGTTCGTGT TCCTCGCGGC CGTGGCGGCC
GGCACGCTGA TCGGCGGGCC GGTCGGCGAC CGGATCGGCC GCAAGTACGT GATCTGGGTG
TCGATCCTCG GCGTCGCGCC GTTCACGCTG CTGCTGCCGT ACGCGAACCT GTTCTGGACG
AGCGTGCTGA GCGTGATCAT CGGCATCGTG CTGGCGTCGG CGTTCGCCGC GATCCTCGTC
TATGCGACGG AGCTGATGCC GGGCAAGGTC GGGATGGTCG CAGGCCTGTT CTTCGGCTTC
GCGTTCGGCC TGGGCGGCGT GGGCGCCGCC GTGCTGGGCC AGCTCGCGGA CGCGACGAGC
ATCACGTTCG TCTACAAGGT GTGCTCGTTC CTGCCGCTGA TCGGCGTGCT GACGGTGTTC
CTGCCGAACC TCGAAAGCGC GCGCCGCAAG AAGGCGTGA
 
Protein sequence
METSLDTGAG NAAAAQPSAP PAARTVYPVL GAISFSHMLN DMIQSLILAI YPMLKSQFAL 
SFAQIGLITL TYQITASLLQ PLIGLYTDKR PKPYSLPVGM GFTLAGLLLM SAAQNFPTLL
AAAALVGCGS SVFHPESSRV ARMASGGQHG LAQSLFQVGG NAGSALGPLL AALVIIPHGQ
HSIAWFSAAA LVAMVVLTQI GHWYKKHPSM KKKAAAAGHP TLSPRRVLAA IGVLVLLVFS
KYFYLASINS YFTFYLIDKF HLSVQAAQIH LFVFLAAVAA GTLIGGPVGD RIGRKYVIWV
SILGVAPFTL LLPYANLFWT SVLSVIIGIV LASAFAAILV YATELMPGKV GMVAGLFFGF
AFGLGGVGAA VLGQLADATS ITFVYKVCSF LPLIGVLTVF LPNLESARRK KA