Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1364 |
Symbol | |
ID | 6179035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1515110 |
End bp | 1515904 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681119 |
Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Protein accession | YP_001808068 |
Protein GI | 172060416 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.370611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG ACATGGTCGG AACGGTTTCG ATGCGCCCGC TCGGCATTCT GGCCGCGCTG CCCGAGGAGC TCGGCGACCT GATCGCCGCG ATGCGCGCCG AGGGCGTGAT GAAGACGATC ACGCTCGGCC GCCGCGACTA CCACCTCGGC ACGGTGCACG GCGCGGCCTG CGTCGTCACG CTCGCGCGGG TCGGCAAGGT CGCGGCCGCC GCGACGGTCA GTGCACTGAT CCATGTGTTC GGCGTGTCCG GCGTCGTGTT CACCGGCGTC GCCGGTGGCG TGTCGCGCAC CGTGCGCGTC GGCGATGTCG TCGTCGCAGA TACGCTGCTG CAGCACGACC TCGATGCGTC GCCGCTGTTT CCGCGCTACG AGGTGCCGCT GCTCGGCATC ACGCGGTTCG CGACCGACCT GGAACTGACG GCCCGCCTGA AGGCCGCATG CACGCTGTTC GTCGCCGAGG AGGGCGCGCG GTTCGCCGAG CGTTTCGGGC TGGCCGGCGC GTCGCTGCAC GGCGGGCTGA TCATCAGCGG CGACCGCTTC GTGTCGAGCG AGCGCGAGGT CGTCGCGCTG CGCGATGCGT TGCCCGACGC GCTCGCGGTC GAGATGGAAG GCGCGGCGAT CGCGCAGGTG TGCGCCGAAC ACGACGTGCC GTTCGCTCTC GTGCGCACGA TCTCCGATAC TGCCGACGAC CACGCGACGC AGTCGTTCTC GCACTTCCTG TCGGCGATCG CGAGCAGCTA TTCGACCGGC ATCCTCAAGC GTTTCCTGAC GCTGCATGCG ACGACGGCGG CCTGA
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Protein sequence | MSIDMVGTVS MRPLGILAAL PEELGDLIAA MRAEGVMKTI TLGRRDYHLG TVHGAACVVT LARVGKVAAA ATVSALIHVF GVSGVVFTGV AGGVSRTVRV GDVVVADTLL QHDLDASPLF PRYEVPLLGI TRFATDLELT ARLKAACTLF VAEEGARFAE RFGLAGASLH GGLIISGDRF VSSEREVVAL RDALPDALAV EMEGAAIAQV CAEHDVPFAL VRTISDTADD HATQSFSHFL SAIASSYSTG ILKRFLTLHA TTAA
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