| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1363 |
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| Symbol | |
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| ID | 6178917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1512747 |
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| End bp | 1515110 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681118 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001808067 |
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| Protein GI | 172060415 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.485952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC TGCTCGCCAA TCTGAACCCT GAACAATACG CCGCCGTCAC GTTGCCGAAC
GAACCGGCGC TGATCCTCGC GGGGGCGGGC AGCGGCAAGA CCCGCGTGCT GATCACCCGC
ATCGCGTGGC TGATCCAGCA GGGGTACGCG TCGCCGCCCA CCGTGCTGGC CGTCACCTTC
ACGAACAAGG CCGCGCGCGA GATGATGGCG CGCTTGTCAG CGATGATGCC GATCGACACG
CGCGGGATGT GGATCGGCAC GTTCCACGGG CTGTGCAACC GGATGCTGCG CACCCACTGG
CGCGACGCCG GCCTGCCGCA GACCTTCCAG ATCCTCGACA CGGCCGATCA ATTGTCCGCG
ATCAAGCGGC TGATGAAGGC GGCGAACGTC GACGACGAGA AGTACCCGCC GAAGAATGTC
CAGTACTTCA TCAACAACGC GAAGGAGCAG GGGCTGCGTC CCGACAAGGT CGACGCGACC
GACAACTTCA ACCGCAAGTT CGTCGAGCTG TACCAGGCGT ACGACCAGCA GTGCCAGCGC
GAGGGTGTGG TCGATTTCCC CGAGCTGCTG CTGCGCTGCT ACGAGCTGCT CGCGTACAAC
GCACCGCTGC GCGCGCACTA CCAGGCACGC TTCAGGCACA TCCTCGTCGA CGAGTTCCAG
GACACCAACA AGCTGCAGTA CGCATGGCTG AAGATGCTCG CGGGCGGCGA GAACGCGATC
TTCGCGGTCG GCGACGACGA CCAGTCGATC TACGCGTTCC GCGGCGCGAA CGTCGGCAAC
ATGCGCGACT TCGAAGACGA ATTCCGCGTG CGCAACCTGA TCAAGCTCGA GCAGAACTAC
CGGTCGCACG GCAACATCCT CGACGCGGCG AACCAGCTGA TCTCGAACAA CGCGCACCGC
CTCGGCAAGA ACCTGCGCAC CGACGCCGGC CACGGCGAGC CCGTGCGCGT GTACGAGGCG
AGCACTGATG CGCAGGAAGC CGGCTGGATC GTCGAGGAGA TCCGCTCGCT GATCAACACC
GGGATGTCGC GCAGCGAAGT CGCGGTCCTG TATCGCAGCA ACGCGCAATC GCGCGCGATC
GAGCACACGC TGATGACTTC GGGCATTCCG TATCGCGTGT ACGGCGGCCT GCGCTTCTTC
GAGCGCCAGG AAGTGAAGCA TGCGCTCGCG TACCTGCGCC TGATCGACAA CCCGAACGAC
GACACCGCGT TCGCCCGCGT CGTGAACTTC CCGACGCGCG GGATCGGCGC GCGCTCCATC
GAGCAGCTCG CGGATGCCGC GCGCCTGTAC GACTGCTCGA TGGCCGCCGC GATTCCGTAC
GTGACCGGCA AGGCCGGCAC GAGCCTCGGC GGGTTCGCGA CGCTGATCGC GAAGATGCGC
GCCGAGACGC AGCAGATGAG CCTGCCCGAG ACGGTCGAGT ACGTCGTGCG CGCGAGCGGC
CTCGCCGATT TCTACCAGGG CGAGCGCGAA GGCCAGGACC GCCTCGAGAA CTTGCAGGAA
CTCGTGAACG CGGCCACCGC GTTCGTCAGC GAGGAAGGCT ACGGGCTCGA CGCGCCGGCC
CGCTCGATCC CGCTGCGCGC GGGGGCGATC GCGGCGCCGG AGCTCGGCGT GGACGCGAAC
GATCCGTCGG TCGACGTGCT GGATCCGGCG CCGCTCGACG ACCCCGCGCA GAACCCCGAC
ACGATGACGC CGCTCGCGGG CTTCCTGTCG CACGCCTCGC TCGAAGCCGG CGACAACCAG
GCGCAGGCCG GCCAGGACGC CGTGCAGCTG ATGACGGTGC ACGCGGCGAA GGGCCTCGAA
TTCTCGGCCG TGTTCATCAC CGGCCTCGAG GAAGGGCTGT TCCCGCACGA GAACAGCGTG
CTCGAATCGG ACGGCCTCGA GGAAGAGCGC CGGCTGATGT ACGTCGCGAT CACGCGCGCG
AAGGAGCGGC TCTACCTGTC GTTCGCGCAG AGCCGGATGC TGCACGGCCA GACGCGCTAC
AACGTGCGCT CGCGCTTCTT CGATGAATTG CCGGAGCACG TGCTGAAGTG GCTCACGCCG
AAGGTCGAGG CGGGCGCGCG CTGGGGCGGC CGCTCGGACA ACGCCGGCTG GGGGCGCGAT
TGGTTCTCGC GGCCGGGTGG CGGCAGTCGC GAGCAGGTCG TCGACGCGGC GGTTTCCGCG
CCGCTGCCGG CGTTCGCGAA CAAGCAGCGC GCGGCCGACA CCGGCTTTCG CGTCGGCCAG
CAGGTGTTTC ATACCAAGTT CGGCGAAGGC ACGGTCACCG CGCTCGAAGG CAACGGAGCC
GACGCGAAGG CGCAGGTGAA GTTCAAGCGG CACGGCGAGA AGTGGCTCGC GCTGGCAGTC
GCGAAACTGC AGGCGGTGGA ATGA
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| Protein sequence | MPDLLANLNP EQYAAVTLPN EPALILAGAG SGKTRVLITR IAWLIQQGYA SPPTVLAVTF
TNKAAREMMA RLSAMMPIDT RGMWIGTFHG LCNRMLRTHW RDAGLPQTFQ ILDTADQLSA
IKRLMKAANV DDEKYPPKNV QYFINNAKEQ GLRPDKVDAT DNFNRKFVEL YQAYDQQCQR
EGVVDFPELL LRCYELLAYN APLRAHYQAR FRHILVDEFQ DTNKLQYAWL KMLAGGENAI
FAVGDDDQSI YAFRGANVGN MRDFEDEFRV RNLIKLEQNY RSHGNILDAA NQLISNNAHR
LGKNLRTDAG HGEPVRVYEA STDAQEAGWI VEEIRSLINT GMSRSEVAVL YRSNAQSRAI
EHTLMTSGIP YRVYGGLRFF ERQEVKHALA YLRLIDNPND DTAFARVVNF PTRGIGARSI
EQLADAARLY DCSMAAAIPY VTGKAGTSLG GFATLIAKMR AETQQMSLPE TVEYVVRASG
LADFYQGERE GQDRLENLQE LVNAATAFVS EEGYGLDAPA RSIPLRAGAI AAPELGVDAN
DPSVDVLDPA PLDDPAQNPD TMTPLAGFLS HASLEAGDNQ AQAGQDAVQL MTVHAAKGLE
FSAVFITGLE EGLFPHENSV LESDGLEEER RLMYVAITRA KERLYLSFAQ SRMLHGQTRY
NVRSRFFDEL PEHVLKWLTP KVEAGARWGG RSDNAGWGRD WFSRPGGGSR EQVVDAAVSA
PLPAFANKQR AADTGFRVGQ QVFHTKFGEG TVTALEGNGA DAKAQVKFKR HGEKWLALAV
AKLQAVE
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