| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1341 |
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| Symbol | |
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| ID | 6176376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1485202 |
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| End bp | 1487085 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681096 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001808045 |
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| Protein GI | 172060393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CCGTGAGACT GACCGTCAGC CAGGCGCTCG TGCGCTACCT GGCCGCCCTG
CGCGCCGAAG TCGTCCAGCC GGACGGCCGC ACCGGGATCC TGCCGTACTG CGGCGGCGTG
TTCGCGATCT TCGGCCACGG CAACGTCGCC GGGCTCGGCG AGGCGCTCTA CTCCGAACGG
GAGCGGCTGC CGACGTTCCG CGCGCACAAC GAGCAAGGCA TGGCGAATGC GGCCATCGCG
TTCGCGAAGG CGAATTTCCG CCAGCGGATG ATGGCCGCGA CGTCGAGCAT CGGCCCCGGC
GCGACCAACA TGCTGACCTC GGCCGCGCTC GCGCACGTCG CCCGGCTGCC GCTGTTGCTG
CTGCCCGGCG ACGTGTTCGT GTCGCGGCTG CCCGACCCGG TGCTGCAGCA GGTCGAGGAC
TTCGAACAAG GCGACGTCAG CGCGAACGAC TGCTTCCGGC CGGTGACGCG CTACTTCGAC
CGGATCACGT CGCCCGAGCA GCTGCTCGTC GCGCTGCCGC GCGCGATCCA GGTGATGACC
GATCCCGCGC AGTGCGGCCC CGTGTGTCTC GCGCTGCCGC AGGACGTGCA GACCTTCGCT
TACGACTGGC CCGAGGACTT CTTCGCGCCG CCGGTGATCC GGATGCGCCG GCCGCCGGCC
GACGCGCTCG AACTCGCGGA CGCGCTCGAC GTGCTGAAGG CCGCGAAGAA GCCGCTGATC
GTCGCCGGCG GCGGCGTGCT GTACAGCCAG GCATGGGACG CGCTGCGCAC GTTCGCCGAC
ACGCACGGCG TGCCGGTCGC CGAATCGCAG GCCGGCAAGG GCAGCCTCGC GTGGGACCAC
CCGCTGAACC TCGGGTCGAT CGGCGTGACG GGCTCGCCCG CCGCGAACCG CGCGGCCGCG
CAGGCCGACG TGGTGTTCGC GGTCGGCACG CGCCTGCAGG ACTTCACGAC CGGCTCGCAC
GCGCTGTTCG GCCATGCCAC GCTGCTGAGC CTGAACGTGC AGCCGTTCGA CGCAGGCAAG
AAGCGCGGCC GGCAATTGAT CGCCGATGCG CGCACCGGCC TCGGCCAGTT GTCCGCCGCG
CTCGCGGGCT GGCGCGCGGA TGCGGGATGG ACCGCCGCGA ACCGCGACCA GGCCGCCGCG
TGGAACGCGC GCGTGACCGA GCTGACCACG CGCGTGCCGA CCGACACGCT GCCGTACGAC
GCGGAAGTGA TCGGTGCGGT GCGCGATTCC GCGGCCGACG CGGGACGCGA CAGCGCGCGC
GACGATCTCG TCGTGTGCGC GGCCGGCACG CTGCCGGCCG AGCTGCACAA GCTGTGGCGC
AGCGGCGTGC CGGGCAACTA CCACATGGAC TATGCGTACT CGTGCATGGG CTACGAGATC
GCGGGCGGCC TTGGCGCGAA GCTCGCGCGG CCGGAGCGCG AAGTGATCGT GATCGTCGGC
GACGGCTCGT ACATGATGCT CAACGCGGAA CTCGCGACCT CCGTGATGCT CGGCCGCAAG
CTCATCGTCG TGATCCTCGA CAACCGCGGC TACGGCTGCA TCGAGCGGCT GCAACTGAAT
TGCGGCGGCG CGAGCTTCAA CAACATGCTC GACGACTGCG TGCCGGAAGG CGGCGAGCGC
TCGACGATCG ACTTCGCGAT GCATGCGCGC GCGATGGGCG CCGAAGCCGT GCACGTGCGC
GACGTCGGTG AGCTGCGCCG CGAGATGAAG CGTGCGCGCG CGGCCACGAC GAGCCAGGTG
CTCGTGATCG ACACGACGCA CGAGCGCACG ACCGCGGACG GCGGCGCGTG GTGGGAAGTC
GCGGTGCCGC AGGTGTCCGC GCGCGCCGGC GTCGAACGCG CGCACCACGC GTATCTCGAC
GAAAAAACCC GGCAGCGGCG CTGA
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| Protein sequence | MTTTVRLTVS QALVRYLAAL RAEVVQPDGR TGILPYCGGV FAIFGHGNVA GLGEALYSER
ERLPTFRAHN EQGMANAAIA FAKANFRQRM MAATSSIGPG ATNMLTSAAL AHVARLPLLL
LPGDVFVSRL PDPVLQQVED FEQGDVSAND CFRPVTRYFD RITSPEQLLV ALPRAIQVMT
DPAQCGPVCL ALPQDVQTFA YDWPEDFFAP PVIRMRRPPA DALELADALD VLKAAKKPLI
VAGGGVLYSQ AWDALRTFAD THGVPVAESQ AGKGSLAWDH PLNLGSIGVT GSPAANRAAA
QADVVFAVGT RLQDFTTGSH ALFGHATLLS LNVQPFDAGK KRGRQLIADA RTGLGQLSAA
LAGWRADAGW TAANRDQAAA WNARVTELTT RVPTDTLPYD AEVIGAVRDS AADAGRDSAR
DDLVVCAAGT LPAELHKLWR SGVPGNYHMD YAYSCMGYEI AGGLGAKLAR PEREVIVIVG
DGSYMMLNAE LATSVMLGRK LIVVILDNRG YGCIERLQLN CGGASFNNML DDCVPEGGER
STIDFAMHAR AMGAEAVHVR DVGELRREMK RARAATTSQV LVIDTTHERT TADGGAWWEV
AVPQVSARAG VERAHHAYLD EKTRQRR
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