Gene BamMC406_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1339 
Symbol 
ID6177561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1483348 
End bp1484166 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID641681094 
Productmyo-inositol catabolism IolB domain-containing protein 
Protein accessionYP_001808043 
Protein GI172060391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT CTCCCCTGCT GGTCAAGGCA TCCGCCGGCC GCGAAATCTG CAACGTGACG 
CCCGAGTCGG CCGGCTGGAA ACACGTCGGC TTTCGCGCGC TGCGCCTGAA GGCCGGCGAC
ACCGAAACGC TCGACACGGG CACGCGCGAA CTGTGCGTCG TCGTGCTCAC GGGCACGCTG
CGCGCACAAG TCGACGGCGA AACCTACAAT GCGCTCGGCA AGCGCGACAG CGTGTTCGAG
GAGGTGTCGC CGGACGCGCT GTACGTGCCG GGCGGCAAGA CCGTCACGCT GGTCGCGACG
CGCGACGCGG AGGTTGCGCT GTGCACCGCG CCCTACGCGA GCGGCGACAA GCGCGTGCAG
CGCCTCGACG GCGAACGGAT GCGCCGCGCG GTGCGCGGGC AAGGCACCAA CACGCGCTAC
GTGTGCGACA TCCTGATGGG CGACAACCCG GCTGCCGACC GTTTGCTGGT GGTCGAAGTG
ATCACGCCCG CGAGCCATTC GAGCAGCTAC CCGCCGCACA AGCACGATCG CGACGCGGCG
CCCGACGAAA CCTCGCTCGA GGAAACCTAT TACCACCGGA TCGATCCGCC GCAAGGTTTC
GCGTTCCAGC GCGTGTACAC GGACAATCGC AGCCTCGACG AAGCGTGCGC GGTCGAGAAC
CACGACGTCG TGATGGTGCC GCGCGGCTAT CACCCGGTGG TCGCGCCGCA CGGCTACAAC
CTGTACTACC TGAACGTGAT GGCCGGGCCG AGCCGCGCAT GGGCGTTCAG GAACGATCCC
GCGCACGAGT GGATGCTCGA CGCGGCGCCC AAGCGCTGA
 
Protein sequence
MTISPLLVKA SAGREICNVT PESAGWKHVG FRALRLKAGD TETLDTGTRE LCVVVLTGTL 
RAQVDGETYN ALGKRDSVFE EVSPDALYVP GGKTVTLVAT RDAEVALCTA PYASGDKRVQ
RLDGERMRRA VRGQGTNTRY VCDILMGDNP AADRLLVVEV ITPASHSSSY PPHKHDRDAA
PDETSLEETY YHRIDPPQGF AFQRVYTDNR SLDEACAVEN HDVVMVPRGY HPVVAPHGYN
LYYLNVMAGP SRAWAFRNDP AHEWMLDAAP KR