Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1312 |
Symbol | |
ID | 6177798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1454373 |
End bp | 1455959 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641681069 |
Product | acid phosphatase |
Protein accession | YP_001808018 |
Protein GI | 172060366 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0809343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC ACGCCTGGAT TCGCTACACA CCGCTCGCCC TCGCGGCCGC GCTCAGCCTG ACCGCCTGCG GCGGCGACGA TGTCACGCAA CAAGGCCTGT CGGCAGTCAA GAACGTCGTC GTCATCTACG CGGAAAACCG CAGCTTCGAC AACCTGTACG GCAACTTCCC GGGTGCGAAC GGTCTGCAGA ACGCGACGGC CGCGAACTCG GTGCAGAAGG ATCGCGACGG TTCGACGATG GCGACGCTGC CGAAGATCTG GGGCGGCCTG ACCGCGACCG GCATCACGCC GGCCGTCACC GAGGCGATGA CGGCGAACCT GCCGAACGCG CCGTTCGCGA TCGACGATCC GAACGGCTTC AACCAGTCGA TGAGCATCGC GACGCGCGAC ATCGTGCACC GCTTCTACCA GGACCAGATG CAGATCGACG GCGGCAAGAA CGACATGTAT GCCGCATGGA CCGATGCGGG CGGCCTGACG ATGGGCCACT ACACGGCGGA TCCGTCGAAG CTGCCGCTGT GGAAGATCGC GCAGCAGTAC GTGCTGGCCG ACAACTTCTT CATGGGCGCG TTCGGCGGCT CGTTCCTGAA CCACCAGTAC CTGATCTGCG CGTGCGCGCC GTTCTACGCC AATGCCGACA AGAGCCCGGC GGCCGGCAAG ATCGCAGTCC TGAACGCCGA CGGCAAGTCG CTGAAGGTCG CCACGAACTC GCCGGCCTCC GCACTGAGCG GCCCGCCGAA GTTCGTCAAC GACGGCGCGC TGACGCCTGA CTTCTATGGC GTCAACACGA TGCAGCCGGC GTACCAGCCG AGCGGCAACA AGGCCGCCAC GGGCGGCGAC CCGCTGCTCG CCGATCCGGC CAATCCGTCG ACGATGCCGC CGCAGACGGC GACCAACATC GGCGACCTGA TGACCAACGC GGGCGTCTCG TGGGCATGGT ATGGCGGCGC ATGGGGCCAG GCGCTGCAGG CGAGCCAGAA CGGCACGTCG AACGTGATCT ACGGCGCCGA TCTGTCCACG CCGAACTTCC AGCCGCACCA TCAGCCGTTC AACTACTTCG CGAACCAGGC GCCGGGCACC GCGAACCGCG CGCAGCACCT GCTCGACGGC GGCGCGAACG GTGCCGAGTT CATCAAGGCG GTCGACGCGG GCACGCTGCC GCAGGTTGCG TTCTACAAGC CGCAGGGCAA CCTGAACGAA CATCCTGGCT ACACGGACGT CGCCTCCGGC GATCAGCACA TCGCCGATGT GATCGCGCAC CTGCAGGCAA GCCCGCAGTG GAAGAACATG GTCGTCGTCG TCACGTACGA CGAGAACGGC GGCTTCTGGG ATCATGCCAC GCCGCCGACC GCCGATCGCT GGGGCCCGGG CACCCGCATT CCGGCGCTGA TCGTGTCGCC GTATGCGAAG AAGGGTTTCG TCGACCACAC GCAGTACGAC ACGGGTTCGA TCCTGCGCTT CATCACGCGC CGCTTCTCGC TGCCGCGCCT CGCGGGCCTG CAGCAACGCG ACGACGCGCT GAAAGCGAAC GGCGCGCAGC CGATGGGCGA CCTGACGAAC GCGCTCGCGC TGTCGCCGAA CCTGTAA
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Protein sequence | MKKHAWIRYT PLALAAALSL TACGGDDVTQ QGLSAVKNVV VIYAENRSFD NLYGNFPGAN GLQNATAANS VQKDRDGSTM ATLPKIWGGL TATGITPAVT EAMTANLPNA PFAIDDPNGF NQSMSIATRD IVHRFYQDQM QIDGGKNDMY AAWTDAGGLT MGHYTADPSK LPLWKIAQQY VLADNFFMGA FGGSFLNHQY LICACAPFYA NADKSPAAGK IAVLNADGKS LKVATNSPAS ALSGPPKFVN DGALTPDFYG VNTMQPAYQP SGNKAATGGD PLLADPANPS TMPPQTATNI GDLMTNAGVS WAWYGGAWGQ ALQASQNGTS NVIYGADLST PNFQPHHQPF NYFANQAPGT ANRAQHLLDG GANGAEFIKA VDAGTLPQVA FYKPQGNLNE HPGYTDVASG DQHIADVIAH LQASPQWKNM VVVVTYDENG GFWDHATPPT ADRWGPGTRI PALIVSPYAK KGFVDHTQYD TGSILRFITR RFSLPRLAGL QQRDDALKAN GAQPMGDLTN ALALSPNL
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