Gene BamMC406_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1312 
Symbol 
ID6177798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1454373 
End bp1455959 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content67% 
IMG OID641681069 
Productacid phosphatase 
Protein accessionYP_001808018 
Protein GI172060366 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID[TIGR03397] acid phosphatase, Burkholderia-type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0809343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC ACGCCTGGAT TCGCTACACA CCGCTCGCCC TCGCGGCCGC GCTCAGCCTG 
ACCGCCTGCG GCGGCGACGA TGTCACGCAA CAAGGCCTGT CGGCAGTCAA GAACGTCGTC
GTCATCTACG CGGAAAACCG CAGCTTCGAC AACCTGTACG GCAACTTCCC GGGTGCGAAC
GGTCTGCAGA ACGCGACGGC CGCGAACTCG GTGCAGAAGG ATCGCGACGG TTCGACGATG
GCGACGCTGC CGAAGATCTG GGGCGGCCTG ACCGCGACCG GCATCACGCC GGCCGTCACC
GAGGCGATGA CGGCGAACCT GCCGAACGCG CCGTTCGCGA TCGACGATCC GAACGGCTTC
AACCAGTCGA TGAGCATCGC GACGCGCGAC ATCGTGCACC GCTTCTACCA GGACCAGATG
CAGATCGACG GCGGCAAGAA CGACATGTAT GCCGCATGGA CCGATGCGGG CGGCCTGACG
ATGGGCCACT ACACGGCGGA TCCGTCGAAG CTGCCGCTGT GGAAGATCGC GCAGCAGTAC
GTGCTGGCCG ACAACTTCTT CATGGGCGCG TTCGGCGGCT CGTTCCTGAA CCACCAGTAC
CTGATCTGCG CGTGCGCGCC GTTCTACGCC AATGCCGACA AGAGCCCGGC GGCCGGCAAG
ATCGCAGTCC TGAACGCCGA CGGCAAGTCG CTGAAGGTCG CCACGAACTC GCCGGCCTCC
GCACTGAGCG GCCCGCCGAA GTTCGTCAAC GACGGCGCGC TGACGCCTGA CTTCTATGGC
GTCAACACGA TGCAGCCGGC GTACCAGCCG AGCGGCAACA AGGCCGCCAC GGGCGGCGAC
CCGCTGCTCG CCGATCCGGC CAATCCGTCG ACGATGCCGC CGCAGACGGC GACCAACATC
GGCGACCTGA TGACCAACGC GGGCGTCTCG TGGGCATGGT ATGGCGGCGC ATGGGGCCAG
GCGCTGCAGG CGAGCCAGAA CGGCACGTCG AACGTGATCT ACGGCGCCGA TCTGTCCACG
CCGAACTTCC AGCCGCACCA TCAGCCGTTC AACTACTTCG CGAACCAGGC GCCGGGCACC
GCGAACCGCG CGCAGCACCT GCTCGACGGC GGCGCGAACG GTGCCGAGTT CATCAAGGCG
GTCGACGCGG GCACGCTGCC GCAGGTTGCG TTCTACAAGC CGCAGGGCAA CCTGAACGAA
CATCCTGGCT ACACGGACGT CGCCTCCGGC GATCAGCACA TCGCCGATGT GATCGCGCAC
CTGCAGGCAA GCCCGCAGTG GAAGAACATG GTCGTCGTCG TCACGTACGA CGAGAACGGC
GGCTTCTGGG ATCATGCCAC GCCGCCGACC GCCGATCGCT GGGGCCCGGG CACCCGCATT
CCGGCGCTGA TCGTGTCGCC GTATGCGAAG AAGGGTTTCG TCGACCACAC GCAGTACGAC
ACGGGTTCGA TCCTGCGCTT CATCACGCGC CGCTTCTCGC TGCCGCGCCT CGCGGGCCTG
CAGCAACGCG ACGACGCGCT GAAAGCGAAC GGCGCGCAGC CGATGGGCGA CCTGACGAAC
GCGCTCGCGC TGTCGCCGAA CCTGTAA
 
Protein sequence
MKKHAWIRYT PLALAAALSL TACGGDDVTQ QGLSAVKNVV VIYAENRSFD NLYGNFPGAN 
GLQNATAANS VQKDRDGSTM ATLPKIWGGL TATGITPAVT EAMTANLPNA PFAIDDPNGF
NQSMSIATRD IVHRFYQDQM QIDGGKNDMY AAWTDAGGLT MGHYTADPSK LPLWKIAQQY
VLADNFFMGA FGGSFLNHQY LICACAPFYA NADKSPAAGK IAVLNADGKS LKVATNSPAS
ALSGPPKFVN DGALTPDFYG VNTMQPAYQP SGNKAATGGD PLLADPANPS TMPPQTATNI
GDLMTNAGVS WAWYGGAWGQ ALQASQNGTS NVIYGADLST PNFQPHHQPF NYFANQAPGT
ANRAQHLLDG GANGAEFIKA VDAGTLPQVA FYKPQGNLNE HPGYTDVASG DQHIADVIAH
LQASPQWKNM VVVVTYDENG GFWDHATPPT ADRWGPGTRI PALIVSPYAK KGFVDHTQYD
TGSILRFITR RFSLPRLAGL QQRDDALKAN GAQPMGDLTN ALALSPNL