Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1300 |
Symbol | |
ID | 6177911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1443267 |
End bp | 1444151 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681057 |
Product | pirin domain-containing protein |
Protein accession | YP_001808006 |
Protein GI | 172060354 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.937895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0576323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT CGATCAAGAC CGTACTCACG CCGCGCGAAA GCGACATCGG CAACCTCGTC GTGCGCCGCG TGCTGCCCGC GCGCGCCGCG CGCCTCGTCG GCCCGTTCAT CTTCTTCGAC GAAATGGGGC CGGCCGTGCT GCCCGCCGGC AGCGGCATCG ACGTGCTGCC GCATCCGCAC ATCGGTCTCG CGACCGTCAC CTATCTGTTC GACGGCACGC TGATGCATCA CGACAGCCTC GGCTTCCGGC AGAAGATCGT GCCCGGCGAC GTGAACTGGA TGACAGCCGG ACGCGGCATC GTCCATTCGG AGCGTTCGCC CGACGAGGAT CGGCCGCTCG AGCAACCCGT GCACGGGATC CAGACCTGGG TCGCGCTGCC GGTCGAGCAC GAGGACACGG CGCCCGCGTT CGCGCATCAC GCGGCCGACA TGCTGCCATC GTTCACGCGC GACGGCGCGA GCGTGCGCGT GATCGCGGGC ACCGCGTTCG GGCTCACGTC GCCGGTCGCC GTGTTCTCGC CGACGCTCTA TGCGTATGCG GAATTCGCGG CGGGCGGCCA ACTCGCGCTC GACGCGGAGC ACGACGAGCG CGGCGTGTAT CTCGTCGATG GCGAGCTCAC GATCGACGGC GCGCCGCTCG CGCCGGCGAC GATGGCCGTG CTCGAACCCG GCGCGAACGT GTCGCTCGCG AGCGCGAACG GCGCGCGCGT GATGCTGCTC GGCGGTGCGC ACCTGCCGGG CGAGCGGTTC ATCGAATGGA ATTTCGTGTC GAGCGAGCGC GCGAAGATCG AGGCGGCCCG CAACGCGTGG GCCGAGCAGA CCTTCGGCAA GGTGCCGGGC GAGGAAAACG AGTGGACGCG CCAGCCGGCG CGCAAGGCGC AGTAA
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Protein sequence | MSASIKTVLT PRESDIGNLV VRRVLPARAA RLVGPFIFFD EMGPAVLPAG SGIDVLPHPH IGLATVTYLF DGTLMHHDSL GFRQKIVPGD VNWMTAGRGI VHSERSPDED RPLEQPVHGI QTWVALPVEH EDTAPAFAHH AADMLPSFTR DGASVRVIAG TAFGLTSPVA VFSPTLYAYA EFAAGGQLAL DAEHDERGVY LVDGELTIDG APLAPATMAV LEPGANVSLA SANGARVMLL GGAHLPGERF IEWNFVSSER AKIEAARNAW AEQTFGKVPG EENEWTRQPA RKAQ
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