Gene BamMC406_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1297 
Symbol 
ID6176908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1438912 
End bp1441449 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content70% 
IMG OID641681054 
Productcellulose synthase catalytic subunit (UDP-forming) 
Protein accessionYP_001808003 
Protein GI172060351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID[TIGR03030] cellulose synthase catalytic subunit (UDP-forming) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0874534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0554868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG CGTTCGCGTC GCGCTGGCGC GCCAAGGTCC GACGCGCGAC CGACTGGTGC 
GCGCGCGGAA TCGGGCTGCC TGCCGAGCGC ACGCTGCTCG ACTGGCTCGT GCGGCTGTTC
TTCCATGCGC CGCCGCCCGG CCGGCCCGAC CCGGTCCGCC GCCGGGCGCG CACCGCGTTC
CTCTGGCTCG CGCGCGAGTG GGGCGTGCTG CAGCCGCTGA GCCCGCGTGA ATGGCTGTGG
CGCGCGATCG TGCGCGCGCC GCGCGCGGCC GGCGAGCAGC CCGCGCGCGA TCCGCTCGCG
TGGTTCGACA CGTTCGTCGT GCCGGTCTAC GTCGCGGTGC GCGCGCTAGG CGCACACATC
GGCGCACAGC TCGAGCGTTT GCCGTGGGCG CGCTGGGGCG GCTGGCTCGA CGCGCGCGCG
AACGGCGTCG GCCGGCACCG CTGGCTCGCG CCGCTGCTGC TGAGCGCGGG CGGCCTCATG
TGGGCCGCGG CCGCGATGTC GCCGCTGATG CCCGGCGCGC AGTTCGCGTT CTTCGCGATC
GTCGCTGTGC TGGCGCTCGC GCTGCGCCGC CTGCCGGGCC ATCTGCCGAC CCTCGCGCTC
GCGTCGCTCG CGCTGCTCGC CACGCTCCGC TACGTGTGGT GGCGCACGAC CCAGACGCTC
GATTTCCGCA GCCCGGTCGA GGCGGTCGCC GGCTACCTGC TGTACGGCGC CGAAGCCTAT
ACGTGGATGA TCCTGCTGCT CGGCTTCGTG CAGACCGCGT GGCCGCTCGA CCGGCCGATC
GTGCCGCTGC CCGACGACCC GGACAGCTGG CCGAGCGTCG ACATCTACAT CCCGACCTAC
AACGAGCCGC TGTCGGTCGT GAAGCCGACC GTGTTCGCCG CGCAGAGCAT CGACTGGCCG
ACCGGCAAGC TGCGCGTGTA CCTGCTCGAC GACGGCAAGC GCCCCGAGTT CGCGGCGTTC
GCGCGCGAGG CCGGCATCGG CTACCTGACG CGCGACGACA ACCTGCACGC GAAGGCCGGC
AACATCAACC GCGCGCTGCC GAAGACGCAC GGCGAATACA TCGCGATCTT CGACTGCGAT
CACGTGCCGA CGCGCTCGTT CCTGCAGACC ACGATGGGCG TGTTCCTGCG CGACCCGAAA
TGCGCGCTGG TGCAGACGCC GCACCATTTC TTCTCGCCCG ATCCGTTCGA GCGCAACCTC
GGCACGTTCC GCGAGATCCC GAACGAGGGC AACCTGTTCT ACGGGCTCGT GCAGTCGGGC
AACGACCTGT GGAACGCGAC GTTCTTCTGC GGATCGTGCG CGGTGCTCAA GCGCACCGCG
CTGGAGGAGG TAGGCGGCGT CGCGGTCGAG ACCGTGACCG AGGACGCGCA CACCGCGCTC
AAGCTGCATC GCCGCGGCTA TACGTCGGCG TACCTGCCGA CCGTGCAGGC GGCCGGCCTC
GCGACCGAGA GCCTCGCGGG CCACGTGAAG CAGCGCACGC GCTGGGCGCG CGGGATGGCG
CAGATCTTCC GCATCGACAA CCCGTTCCTC GGGCGCGGGC TCGGCTTCAT CCAGCGGATC
TGCTACGGCA ACGCGATGCT GCATTTCTTC TACGGGATCC CGCGGCTCGT GTTCCTGACG
ATTCCGCTCG CGTACCTGTT CTTCCACCTG TACTTCATCA ACGCGTCGTC GATCGCGCTC
GCGAGCTACG TGATCCCGTA TCTGGTGCTC GCGAACGTCG CGAACTCGCG GATGCAGGGG
CGCTATCGCC ATTCGTTCTG GGCCGAGGTC TACGAATCGG TGCTCGCGTG GTACATCGCG
CTGCCGACCA CCGTCGCGTT CTTCAGCCCG AAGCACGGCA AGTTCAACGT GACCGACAAG
GGCGGCAAGA TCGACGAAGG CTACGTCGAC TGGTCGACGT CGAAGCCGTA TCTCGTGCTG
TTCGCGCTGA ACGTGCTCGC GATCGCGGCC GGGCTGTGGC GGCTCGTGGC CGACCAGGGC
GACGAGGCGT CGACGATCCT GATCACGCTC GGCTGGACCG TCTACAACCT CGCGATGCTC
GGCGCGGCGC TGGCGGTTGC GCGCGAGACC AGGCAGGTGC GCGTCACGCA CCGGATCGCG
ATGCGCGTGC CGGCGACGCT GCTGCTCGCC GACGGCTCGA CGGCCGCGTG CTTCACGAGC
GACTACTCGA CCGGCGGCCT CGGCCTCGAG GCTGTGCCGG GGCTGCCGCT CGCGATCGGC
GACACGCTGA CGGTATGCGT GACGCGCGGC GACCGGCCGT TCCCGTTCCC GGTGCGCGTG
AGCCGCGTGA CGCCGACCCA CGTCGGCGTG AGCTTCGAGG CGCTGACGCT CGAGCAGGAG
CGCCAGCTCG TGCAGTGCAC GTTCGGCCGC GCGGACGCGT GGCTCGACTG GCACGCGAGC
ACGCGCACGG ACACGCCGCT GCGCGGGCTG AAGGAAGTGC TGCGCGTGGG CCTGGACGGT
TACGTACGGA TGTGGAAGGG TGTGGCGCGC GGCGTGCAGT CGATGCTGGC ACCGAAGCTC
GATCGGGCGC GCGACTGA
 
Protein sequence
MKAAFASRWR AKVRRATDWC ARGIGLPAER TLLDWLVRLF FHAPPPGRPD PVRRRARTAF 
LWLAREWGVL QPLSPREWLW RAIVRAPRAA GEQPARDPLA WFDTFVVPVY VAVRALGAHI
GAQLERLPWA RWGGWLDARA NGVGRHRWLA PLLLSAGGLM WAAAAMSPLM PGAQFAFFAI
VAVLALALRR LPGHLPTLAL ASLALLATLR YVWWRTTQTL DFRSPVEAVA GYLLYGAEAY
TWMILLLGFV QTAWPLDRPI VPLPDDPDSW PSVDIYIPTY NEPLSVVKPT VFAAQSIDWP
TGKLRVYLLD DGKRPEFAAF AREAGIGYLT RDDNLHAKAG NINRALPKTH GEYIAIFDCD
HVPTRSFLQT TMGVFLRDPK CALVQTPHHF FSPDPFERNL GTFREIPNEG NLFYGLVQSG
NDLWNATFFC GSCAVLKRTA LEEVGGVAVE TVTEDAHTAL KLHRRGYTSA YLPTVQAAGL
ATESLAGHVK QRTRWARGMA QIFRIDNPFL GRGLGFIQRI CYGNAMLHFF YGIPRLVFLT
IPLAYLFFHL YFINASSIAL ASYVIPYLVL ANVANSRMQG RYRHSFWAEV YESVLAWYIA
LPTTVAFFSP KHGKFNVTDK GGKIDEGYVD WSTSKPYLVL FALNVLAIAA GLWRLVADQG
DEASTILITL GWTVYNLAML GAALAVARET RQVRVTHRIA MRVPATLLLA DGSTAACFTS
DYSTGGLGLE AVPGLPLAIG DTLTVCVTRG DRPFPFPVRV SRVTPTHVGV SFEALTLEQE
RQLVQCTFGR ADAWLDWHAS TRTDTPLRGL KEVLRVGLDG YVRMWKGVAR GVQSMLAPKL
DRARD