Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1297 |
Symbol | |
ID | 6176908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1438912 |
End bp | 1441449 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681054 |
Product | cellulose synthase catalytic subunit (UDP-forming) |
Protein accession | YP_001808003 |
Protein GI | 172060351 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0874534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0554868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG CGTTCGCGTC GCGCTGGCGC GCCAAGGTCC GACGCGCGAC CGACTGGTGC GCGCGCGGAA TCGGGCTGCC TGCCGAGCGC ACGCTGCTCG ACTGGCTCGT GCGGCTGTTC TTCCATGCGC CGCCGCCCGG CCGGCCCGAC CCGGTCCGCC GCCGGGCGCG CACCGCGTTC CTCTGGCTCG CGCGCGAGTG GGGCGTGCTG CAGCCGCTGA GCCCGCGTGA ATGGCTGTGG CGCGCGATCG TGCGCGCGCC GCGCGCGGCC GGCGAGCAGC CCGCGCGCGA TCCGCTCGCG TGGTTCGACA CGTTCGTCGT GCCGGTCTAC GTCGCGGTGC GCGCGCTAGG CGCACACATC GGCGCACAGC TCGAGCGTTT GCCGTGGGCG CGCTGGGGCG GCTGGCTCGA CGCGCGCGCG AACGGCGTCG GCCGGCACCG CTGGCTCGCG CCGCTGCTGC TGAGCGCGGG CGGCCTCATG TGGGCCGCGG CCGCGATGTC GCCGCTGATG CCCGGCGCGC AGTTCGCGTT CTTCGCGATC GTCGCTGTGC TGGCGCTCGC GCTGCGCCGC CTGCCGGGCC ATCTGCCGAC CCTCGCGCTC GCGTCGCTCG CGCTGCTCGC CACGCTCCGC TACGTGTGGT GGCGCACGAC CCAGACGCTC GATTTCCGCA GCCCGGTCGA GGCGGTCGCC GGCTACCTGC TGTACGGCGC CGAAGCCTAT ACGTGGATGA TCCTGCTGCT CGGCTTCGTG CAGACCGCGT GGCCGCTCGA CCGGCCGATC GTGCCGCTGC CCGACGACCC GGACAGCTGG CCGAGCGTCG ACATCTACAT CCCGACCTAC AACGAGCCGC TGTCGGTCGT GAAGCCGACC GTGTTCGCCG CGCAGAGCAT CGACTGGCCG ACCGGCAAGC TGCGCGTGTA CCTGCTCGAC GACGGCAAGC GCCCCGAGTT CGCGGCGTTC GCGCGCGAGG CCGGCATCGG CTACCTGACG CGCGACGACA ACCTGCACGC GAAGGCCGGC AACATCAACC GCGCGCTGCC GAAGACGCAC GGCGAATACA TCGCGATCTT CGACTGCGAT CACGTGCCGA CGCGCTCGTT CCTGCAGACC ACGATGGGCG TGTTCCTGCG CGACCCGAAA TGCGCGCTGG TGCAGACGCC GCACCATTTC TTCTCGCCCG ATCCGTTCGA GCGCAACCTC GGCACGTTCC GCGAGATCCC GAACGAGGGC AACCTGTTCT ACGGGCTCGT GCAGTCGGGC AACGACCTGT GGAACGCGAC GTTCTTCTGC GGATCGTGCG CGGTGCTCAA GCGCACCGCG CTGGAGGAGG TAGGCGGCGT CGCGGTCGAG ACCGTGACCG AGGACGCGCA CACCGCGCTC AAGCTGCATC GCCGCGGCTA TACGTCGGCG TACCTGCCGA CCGTGCAGGC GGCCGGCCTC GCGACCGAGA GCCTCGCGGG CCACGTGAAG CAGCGCACGC GCTGGGCGCG CGGGATGGCG CAGATCTTCC GCATCGACAA CCCGTTCCTC GGGCGCGGGC TCGGCTTCAT CCAGCGGATC TGCTACGGCA ACGCGATGCT GCATTTCTTC TACGGGATCC CGCGGCTCGT GTTCCTGACG ATTCCGCTCG CGTACCTGTT CTTCCACCTG TACTTCATCA ACGCGTCGTC GATCGCGCTC GCGAGCTACG TGATCCCGTA TCTGGTGCTC GCGAACGTCG CGAACTCGCG GATGCAGGGG CGCTATCGCC ATTCGTTCTG GGCCGAGGTC TACGAATCGG TGCTCGCGTG GTACATCGCG CTGCCGACCA CCGTCGCGTT CTTCAGCCCG AAGCACGGCA AGTTCAACGT GACCGACAAG GGCGGCAAGA TCGACGAAGG CTACGTCGAC TGGTCGACGT CGAAGCCGTA TCTCGTGCTG TTCGCGCTGA ACGTGCTCGC GATCGCGGCC GGGCTGTGGC GGCTCGTGGC CGACCAGGGC GACGAGGCGT CGACGATCCT GATCACGCTC GGCTGGACCG TCTACAACCT CGCGATGCTC GGCGCGGCGC TGGCGGTTGC GCGCGAGACC AGGCAGGTGC GCGTCACGCA CCGGATCGCG ATGCGCGTGC CGGCGACGCT GCTGCTCGCC GACGGCTCGA CGGCCGCGTG CTTCACGAGC GACTACTCGA CCGGCGGCCT CGGCCTCGAG GCTGTGCCGG GGCTGCCGCT CGCGATCGGC GACACGCTGA CGGTATGCGT GACGCGCGGC GACCGGCCGT TCCCGTTCCC GGTGCGCGTG AGCCGCGTGA CGCCGACCCA CGTCGGCGTG AGCTTCGAGG CGCTGACGCT CGAGCAGGAG CGCCAGCTCG TGCAGTGCAC GTTCGGCCGC GCGGACGCGT GGCTCGACTG GCACGCGAGC ACGCGCACGG ACACGCCGCT GCGCGGGCTG AAGGAAGTGC TGCGCGTGGG CCTGGACGGT TACGTACGGA TGTGGAAGGG TGTGGCGCGC GGCGTGCAGT CGATGCTGGC ACCGAAGCTC GATCGGGCGC GCGACTGA
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Protein sequence | MKAAFASRWR AKVRRATDWC ARGIGLPAER TLLDWLVRLF FHAPPPGRPD PVRRRARTAF LWLAREWGVL QPLSPREWLW RAIVRAPRAA GEQPARDPLA WFDTFVVPVY VAVRALGAHI GAQLERLPWA RWGGWLDARA NGVGRHRWLA PLLLSAGGLM WAAAAMSPLM PGAQFAFFAI VAVLALALRR LPGHLPTLAL ASLALLATLR YVWWRTTQTL DFRSPVEAVA GYLLYGAEAY TWMILLLGFV QTAWPLDRPI VPLPDDPDSW PSVDIYIPTY NEPLSVVKPT VFAAQSIDWP TGKLRVYLLD DGKRPEFAAF AREAGIGYLT RDDNLHAKAG NINRALPKTH GEYIAIFDCD HVPTRSFLQT TMGVFLRDPK CALVQTPHHF FSPDPFERNL GTFREIPNEG NLFYGLVQSG NDLWNATFFC GSCAVLKRTA LEEVGGVAVE TVTEDAHTAL KLHRRGYTSA YLPTVQAAGL ATESLAGHVK QRTRWARGMA QIFRIDNPFL GRGLGFIQRI CYGNAMLHFF YGIPRLVFLT IPLAYLFFHL YFINASSIAL ASYVIPYLVL ANVANSRMQG RYRHSFWAEV YESVLAWYIA LPTTVAFFSP KHGKFNVTDK GGKIDEGYVD WSTSKPYLVL FALNVLAIAA GLWRLVADQG DEASTILITL GWTVYNLAML GAALAVARET RQVRVTHRIA MRVPATLLLA DGSTAACFTS DYSTGGLGLE AVPGLPLAIG DTLTVCVTRG DRPFPFPVRV SRVTPTHVGV SFEALTLEQE RQLVQCTFGR ADAWLDWHAS TRTDTPLRGL KEVLRVGLDG YVRMWKGVAR GVQSMLAPKL DRARD
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