| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1294 |
|---|
| Symbol | |
|---|
| ID | 6177941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1435957 |
|---|
| End bp | 1437924 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641681051 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001808000 |
|---|
| Protein GI | 172060348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03369] cellulose biosynthesis protein BcsE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.372498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.01238 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCG TGAATACGGA AATCGATGCA ACCCGTCCCG CGCTCGGCGC CGCCGGCCTG
CTGGGCCGCC TGCGCGCGCT GCTGCGCACG GGCCCGGCCG GCGGCCGCGC CGGCCCGCTG
AGCCGGCTCG CGATCGACGG GCTGCCCGAT GCGTGGACGC AACTGGAAGC GGGCGGCCTG
TACGCGGTCT ATGCGGCCAC CGGCACGCCG GCGTGCGACG CGCTGGTATG GGAAAGCGCG
CGGCAGTCGC GTACGCGCGA CGTGACGGTC GTGCTGTCAC GCGACGCGGC GCGCGTGGCC
GCGCAGATGC AGGCGCGCGG TTTCGCGGGC GGCGCGCAGC CGGCCGGCTG GCCGCGTAAC
CTGAACGTGC TGGCGATGCC GCCCGCCTCG GTGCCCGCGG CAGCCGACGG CGATGCCGCG
ATCGAACCGG GCGCGCCGCG CCATGCGGCG CCCGCGCCGT TCGCACGGCT CGCGGGCGGC
TTGCGCGCGA TGAAGCGCTA CGGCTATCGC ACGCGCTCGC TGTATTTCAT CGAAGGCGCG
CAACGCTGGT TCAGCTGGGA CGATCCGGCC GCGCTCGCGG AAGAGGCGCA CGCGCTCGCC
GACTGGTGCC GCACGCACCG GATCGCGCTG GTGCTGCTGG TCGATCCCGA GATCGCGCGC
ACCGGCGCCG CTCCCGACAC CGACGATCCG CCGCTCGTGC GCGTCGCGAA TCGCGCGCCG
CGCAGCGGCT TTCACGGCGT GTGCTCGGGC GTCGCGCAGT TGCAGCGCAC GCACGGCGAG
CTGCTGTGGG TCGTCGATTT CTGGCGCGCG GGCGACACGC TCGCGGCCGG CGAAGTGCGG
CCGCTGCGCT TCGCGCCGGG CGGCCGGCTC GCGGCAATCG TCGACGGCGG TGCCGTCCAG
CCGTCGCGCG GAATGAAGCT CGCGACCGAC GAGGATCGCG TCGTCGCCAG CCGTGCGGCG
CTCGACGATG CGGGCCGCGT GCCCGCCGGC TGGGAAATCG TCGAGGATAA CGCAGCGGTC
GTCGCTGCCT GTGCGCACGC GCAGGCAGCG ACCGCGGTGC TCGCGTTCCG CTCGCATCCG
CAGCTCGAGG CGTTGTGCGC GGCCGTGCAC GCGCTGCGCC GCCAATGCGG CGGCGCGCTG
AAGATCGCCA TCGTCGAACG CGGCGAGGTG CTGCGCCAGC AGTTCGAGAT GCTGTTGCTG
AGCGTCGGCG CGAACCGCGT CGTCGCGCGC GACCTGCCGC TGTCGCGGAT GCAGGCCGCG
GTGAACGCGC TGCACGGGCA GCTCTATGCG CGGCCCGTCG CGCCCGACTA TCGCGCGGCG
CTCGCGGCCG CGCTTGGCGA TTCGGTGCTC GGCTATTTGC CGGTCGGCGC GTTCTGCCTG
CGCATTCGCG CGGTGCTCGA TCGCGGCGCC GTGCTCGCGC TGCCGCATAC GCTCGCGAAG
ATCGCGCTGC TGCCCGGCGT GTCGCACGTC GACGCGCTGC GGCACTGCCG GCCGCGCCGC
GCGGGCGACG TCGTGACCGC CGACGCCGCG CATCTGTACG TGTTCCTGTT CGCGTGCGAA
CCGGTCGATG CCGAGGACGC GCTCGCGCGG ATCTTCGACG TGCCGGTCGA TACGCTGTCC
GATCGCGTCG TGTGTCTCGG GGCAGGCAGC ATCGACACCG AGCTCGATGC GCTGAAGACC
GAGAACCGGC GCGCGCCGAT CGCCGACTAC AGCGACCTGT TCGCGACGGC GAAGCCAGCG
GGCGCGACGC GCGTGCCGGC CGAACGCGCG GGCGAGGGCG TGGGCGCGGA GAATGCCGAA
CCGGGTGGCA TGACCGATCG GAACATCGAT ATATCGCCGC AGCCCGTGCG CGACGAAGAA
ACCGTGCCGG CCGCCGCGGC GCAAGCACTG TCTGCCGACA TTCCCGCCGC GCGGGCGCGC
GGCGCCATCC GCAGCGCGAT GCCGCTGCGC AAGCCGGAGG GCGCATGA
|
|---|
| Protein sequence | MERVNTEIDA TRPALGAAGL LGRLRALLRT GPAGGRAGPL SRLAIDGLPD AWTQLEAGGL
YAVYAATGTP ACDALVWESA RQSRTRDVTV VLSRDAARVA AQMQARGFAG GAQPAGWPRN
LNVLAMPPAS VPAAADGDAA IEPGAPRHAA PAPFARLAGG LRAMKRYGYR TRSLYFIEGA
QRWFSWDDPA ALAEEAHALA DWCRTHRIAL VLLVDPEIAR TGAAPDTDDP PLVRVANRAP
RSGFHGVCSG VAQLQRTHGE LLWVVDFWRA GDTLAAGEVR PLRFAPGGRL AAIVDGGAVQ
PSRGMKLATD EDRVVASRAA LDDAGRVPAG WEIVEDNAAV VAACAHAQAA TAVLAFRSHP
QLEALCAAVH ALRRQCGGAL KIAIVERGEV LRQQFEMLLL SVGANRVVAR DLPLSRMQAA
VNALHGQLYA RPVAPDYRAA LAAALGDSVL GYLPVGAFCL RIRAVLDRGA VLALPHTLAK
IALLPGVSHV DALRHCRPRR AGDVVTADAA HLYVFLFACE PVDAEDALAR IFDVPVDTLS
DRVVCLGAGS IDTELDALKT ENRRAPIADY SDLFATAKPA GATRVPAERA GEGVGAENAE
PGGMTDRNID ISPQPVRDEE TVPAAAAQAL SADIPAARAR GAIRSAMPLR KPEGA
|
|---|
| |