Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1284 |
Symbol | |
ID | 6177998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1422423 |
End bp | 1423160 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641681042 |
Product | hypothetical protein |
Protein accession | YP_001807991 |
Protein GI | 172060339 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.750557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0822065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGA ATGCGGTACA ACAGCCTACG GCAACTCTGC TTCGCGGCCG TATACATAAT CTTCGAAAAA CACGTCGGAG TCAGGATTTC TTTTTTAGCG AGGCTGATCG AGCCAAGATA GGCACAACGG CTATCGCGGC AGGGTTAGCT GGTTTAGGGG GTGTTGCAGT CGGATTGAGT GGTATGGCAA TGGATACCAC CGAGGAAGCA GATTTGCTTG AGTTCGATCT CGATGGAAAA CCGGTGAAAG CATGGATTTG GTGGTCGGTA TTTTCCGAGG GGGATGACGT CGAGGTGGTT GCCGAATATT GGGGAGATAC TTGGCAGGCG TTCGGTATTA GACGGATGGC CGACAAGATT GTGGCGCTTC ACCCGCATTG CAGTCGGGGG CGGATTGCAC ATTATCGAGC ATCATTTAAA TGGGGTGGAA TTTCATTTGC ATCATTGATG TTTTTGGGGT ATTTGATTAT CGCATGCTTT GCGATTTTTA AGGGTGGGGT TCCAATTGAG GAATTGCTTA TATCTGGTGC GATCGGAACT TTAATGACCG CAGCCGGGTT TGCATTTGTA ACATACCGAG TTTCACGAAA AATGATGGGT TTTGTTCGAC TGGCCGAGGG GGTTTTCGAG GGATTCGGCT GGAAAGACGC TAAAAATATC GATCTCCCGG CCATCACGAG GAAGAATAAG AAACCGGGCG AGCCGGAAGC ATTGGGGGTG CTGTATTTCC GCTACTAA
|
Protein sequence | MIKNAVQQPT ATLLRGRIHN LRKTRRSQDF FFSEADRAKI GTTAIAAGLA GLGGVAVGLS GMAMDTTEEA DLLEFDLDGK PVKAWIWWSV FSEGDDVEVV AEYWGDTWQA FGIRRMADKI VALHPHCSRG RIAHYRASFK WGGISFASLM FLGYLIIACF AIFKGGVPIE ELLISGAIGT LMTAAGFAFV TYRVSRKMMG FVRLAEGVFE GFGWKDAKNI DLPAITRKNK KPGEPEALGV LYFRY
|
| |