| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1278 |
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| Symbol | |
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| ID | 6178043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1412139 |
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| End bp | 1413938 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681036 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001807985 |
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| Protein GI | 172060333 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.256171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAA CAACGAAACG AGAGAAACGC ATGAGCGCAC GCACGGCCCG CGAGGCCGAC
TTCATCACGC ACGATGGCGA AACGCTGTTC TATCGTCACT GGCCCGCGAC GGGCCCGCGC
TGCCGCGGCG CGATCGTGCT GCTGCATCGC GGCCACGAAC ATTCCGCGCG CGTCGCGCAT
CTCGTCGACG AGCTCGACCT GCCGGACTTC GCGTTCTTCG CATGGGATGC ACGCGGCCAC
GGCCGCTCGC CCGGCGCGCG CGGCTACAGC CCGAGCGCAG CCGCATCGGT GCGCGACCTG
CAGATCTTCG TCGAGCATAT CCGCGACACG CACGGCATCG CGATCGAGGA TATCGCCGTG
ATCGGGCAGA GCGTCGGCGC GGTGCTCGCC GCCACCTGGG TACACGATTA CGCGCCGCCG
ATCCGCTGCC TCGTGGTCGC GTCGCCGGCG TTCCACATCA AGCTCTACGT GCCGTTCGCG
CGGCCGGGGC TGCGGCTGAT GCACAAGCTG CGCGGGCTGT TCTACGTGAA CAGCTACGTG
AAACCGAAAT TCCTCACGCA TGATCCCGAA CGGATCGCGA GCTATGCGGC CGATCCACTG
ATCACGCGGC CGATCGCCGT GAACATGCTG CTCGACCTGC ACGACACCGC CAAGCGGATC
GTCGCCGATG CGGCCGCGAT CACCGTGCCG ACGCAGCTGC TGATCTCGGG CGCCGACTGG
GTCGTCCATC GCGGCCCGCA GGACCGCTTC TTCGAGCGGC TCGGCGCCGT GCGCAAGGAG
CGCATCGTGC TGCCCGGCTT CTATCACGAC ACGCTCGGCG AGCGCGACCG CGCGCAGGCG
CTCGCGCCGC TGCGCACGTT CGTGCTGCGC GAGTTCGATA CGCCGAGCCC GCGCGTGTCG
CTCGCCGACG CCGACCGGCG CGGCGCATTC CACGACGAAT ACGCGGCACT CGGCCGGCCG
CCCGCGAACC CGTTCGCCCG CGCGTACTGG GCGATCACGC GGGCCGGGCT GAAGGCCGGC
GGCGCGCTGT CGGACGGCAT CGCGCTCGGG CTGCGGCTCG GCTTCGATTC GGGCTCGACG
CTCGACTACG TGTACCGCAA CCGCGCGCAG GGCCGGCTCG GCGTCGGCGC GCTGATCGAC
CGCACGTATC TCGATTCGCC GGGCTGGGTC GGCATCCGTC AGCGCAAGGT GCATCTGCAG
GAGCTGATCG GCGCGGCGAT CGGCCGGCTG CGCGGCCTCG GCGAACCCGT GCGGATCGTC
GACATCGCGG CCGGGCACGG ACGCTATGTG CTCGACGCGA TCGCGACCGC CGCCGAACGC
GACGGCGCGG CGCCCGACGA CATCACGCTG CGCGACTACA GCCCGCCGAA CGTCGAGGCC
GGACGCGTGC TGATCGCGCA GCGCGGCCTC GAGCCGATCG CGCGCTTCGA GCGCGGCGAC
GCGTTCGACG AGGCGTCGCT CGCGATGCTC GAGCCGCGCC CGACGCTCGC GATCGTGTCG
GGACTGTATG AACTGTTCGG CGAGAACGCG CTGATCGAGC GCTCGCTGCG CGGGCTCGCG
CAGGCGGTGC CGCCCGGCGG CTATCTCGTC TATACGGGGC AGCCGTGGCA TCCGCAGCTC
GAATTCATCG CGCGTGCGCT GAACAACCAC CGCGGTGATG CGACCTGGGT GATGCGTCGC
CGCTCGCAGG CCGAGATGGA CGAGCTCGTC GCGCGCGCCG GTTTCCGCAA GCTCGACCAG
CGCATCGACG AGATGGGCAT CTTCACGGTG AGCCTCGCGC AGCGGGTCGA CGCGTCGTGA
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| Protein sequence | MIRTTKREKR MSARTAREAD FITHDGETLF YRHWPATGPR CRGAIVLLHR GHEHSARVAH
LVDELDLPDF AFFAWDARGH GRSPGARGYS PSAAASVRDL QIFVEHIRDT HGIAIEDIAV
IGQSVGAVLA ATWVHDYAPP IRCLVVASPA FHIKLYVPFA RPGLRLMHKL RGLFYVNSYV
KPKFLTHDPE RIASYAADPL ITRPIAVNML LDLHDTAKRI VADAAAITVP TQLLISGADW
VVHRGPQDRF FERLGAVRKE RIVLPGFYHD TLGERDRAQA LAPLRTFVLR EFDTPSPRVS
LADADRRGAF HDEYAALGRP PANPFARAYW AITRAGLKAG GALSDGIALG LRLGFDSGST
LDYVYRNRAQ GRLGVGALID RTYLDSPGWV GIRQRKVHLQ ELIGAAIGRL RGLGEPVRIV
DIAAGHGRYV LDAIATAAER DGAAPDDITL RDYSPPNVEA GRVLIAQRGL EPIARFERGD
AFDEASLAML EPRPTLAIVS GLYELFGENA LIERSLRGLA QAVPPGGYLV YTGQPWHPQL
EFIARALNNH RGDATWVMRR RSQAEMDELV ARAGFRKLDQ RIDEMGIFTV SLAQRVDAS
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