Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1270 |
Symbol | |
ID | 6177571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1403278 |
End bp | 1404576 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681028 |
Product | CitMHS family citrate/H+ symporter |
Protein accession | YP_001807977 |
Protein GI | 172060325 |
COG category | [C] Energy production and conversion |
COG ID | [COG2851] H+/citrate symporter |
TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.166692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGT TACTCGGGCT TGGCACGATC GTCGTGCTGC TGGCCGCGAT TCTGTCGAAG CGGATGTCGC CGCTCGTCGC GCTCATCATC GTGCCGATCG CGGCGTCGCT GATCGGCGGC TTCGGGCTGC ATACGAGCAA ATTCGTGATC GACGGGCTGA AGGGCCTCGC GCCCGTGGTC GGGATGTTCG TCTTCGCGAT CCTCTATTTC GGGACGATCA CCGACGCCGG CACGCTCGAT CCGATCATCG ACCGCATCCT GCGCGCGGTC GGCACGCGGC CCACGCGCAT CGTGATGGGC ACGACGCTGC TCGCGCTGCT GATCCACCTC GACGGCTCGG GCGCCGTCTG CTTTCTCGTG ACGATTCCCG CGGTGCTGCC GCTGTACGAC CGCCTGAAGA TGGACCGGCG CGTGCTGGCC GCGGCCGTGT CGATGGCCGC GGGGATCAAC TTCCTGCCGT GGACGGGGCC GATGATCCGC GCGTCGGCGT CGCTGCACCT GCCGGTGTCG GCGCTGTTCA ATCCGCTGAT TCCGGTGCAG GCGATCGGGC TCGTGTTCGT GTTCGGCGTC GCGTACTGGC TCGGCCGGCG CGAGGAGAAG CGGCTCGGCC TGTCGCGCGA CGATGCGTCG ATTCCACTGC CCAAACGCGA GCTGACGCCC GACGAGCAGG CGCTGCGCCG GCCGCACCTG TTCTGGTTCA ACCTGGTGCT GACGCTCGTC GTACTCGGCA CGATGGTCGT GATGGGCGAG AAGATTCCGC CGGCGATCAT GTTCATGGTC GGGCTGTGCG TCGCGCTGAT GGTGAACTAC CCGAACGTCG ACATGCAGCG AAAGCGCATC GACGCGCACG CGCGCGCGGC GCTGATGATG GCCGGCATCC TGCTCGCGGC CGGGGTGTTT ACCGGGATCA TGCAGGGCAG CGGCATGCTG AAGGCGATGG CGCAGGCGGC GGTCGGCTTC GTGCCGCCGT CGATGGCCGG CCACATTCCT GTCGCGCTCG GCCTCGCGTC GATGCCGCTC AGCATGCTGT TCGATCCCGA TTCGTTCTAC TTCGGCGTGC TGCCGGTGAT CGCGGAGGTG GCCGGCCAGT TCGGCGTGCC GGCCGTGCAT GTCGGGCAGG CCGCGTTGCT CGGCCAGATG ACGACCGGAT TTCCGGTCAG CCCGCTGACG CCCGCGACGT TCCTGGTCGT CGGCCTGTGC GGGATCGAGC TGGCCGAGCA CCAGAAGTTC ACGTTCCCGC TGCTGTTCGG CGCCTCGATC GTGATGACGA TCGCGTGCGT CGTGCTGGGC GTTTTTTGA
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Protein sequence | MLPLLGLGTI VVLLAAILSK RMSPLVALII VPIAASLIGG FGLHTSKFVI DGLKGLAPVV GMFVFAILYF GTITDAGTLD PIIDRILRAV GTRPTRIVMG TTLLALLIHL DGSGAVCFLV TIPAVLPLYD RLKMDRRVLA AAVSMAAGIN FLPWTGPMIR ASASLHLPVS ALFNPLIPVQ AIGLVFVFGV AYWLGRREEK RLGLSRDDAS IPLPKRELTP DEQALRRPHL FWFNLVLTLV VLGTMVVMGE KIPPAIMFMV GLCVALMVNY PNVDMQRKRI DAHARAALMM AGILLAAGVF TGIMQGSGML KAMAQAAVGF VPPSMAGHIP VALGLASMPL SMLFDPDSFY FGVLPVIAEV AGQFGVPAVH VGQAALLGQM TTGFPVSPLT PATFLVVGLC GIELAEHQKF TFPLLFGASI VMTIACVVLG VF
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