Gene BamMC406_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1270 
Symbol 
ID6177571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1403278 
End bp1404576 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content68% 
IMG OID641681028 
ProductCitMHS family citrate/H+ symporter 
Protein accessionYP_001807977 
Protein GI172060325 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.166692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGT TACTCGGGCT TGGCACGATC GTCGTGCTGC TGGCCGCGAT TCTGTCGAAG 
CGGATGTCGC CGCTCGTCGC GCTCATCATC GTGCCGATCG CGGCGTCGCT GATCGGCGGC
TTCGGGCTGC ATACGAGCAA ATTCGTGATC GACGGGCTGA AGGGCCTCGC GCCCGTGGTC
GGGATGTTCG TCTTCGCGAT CCTCTATTTC GGGACGATCA CCGACGCCGG CACGCTCGAT
CCGATCATCG ACCGCATCCT GCGCGCGGTC GGCACGCGGC CCACGCGCAT CGTGATGGGC
ACGACGCTGC TCGCGCTGCT GATCCACCTC GACGGCTCGG GCGCCGTCTG CTTTCTCGTG
ACGATTCCCG CGGTGCTGCC GCTGTACGAC CGCCTGAAGA TGGACCGGCG CGTGCTGGCC
GCGGCCGTGT CGATGGCCGC GGGGATCAAC TTCCTGCCGT GGACGGGGCC GATGATCCGC
GCGTCGGCGT CGCTGCACCT GCCGGTGTCG GCGCTGTTCA ATCCGCTGAT TCCGGTGCAG
GCGATCGGGC TCGTGTTCGT GTTCGGCGTC GCGTACTGGC TCGGCCGGCG CGAGGAGAAG
CGGCTCGGCC TGTCGCGCGA CGATGCGTCG ATTCCACTGC CCAAACGCGA GCTGACGCCC
GACGAGCAGG CGCTGCGCCG GCCGCACCTG TTCTGGTTCA ACCTGGTGCT GACGCTCGTC
GTACTCGGCA CGATGGTCGT GATGGGCGAG AAGATTCCGC CGGCGATCAT GTTCATGGTC
GGGCTGTGCG TCGCGCTGAT GGTGAACTAC CCGAACGTCG ACATGCAGCG AAAGCGCATC
GACGCGCACG CGCGCGCGGC GCTGATGATG GCCGGCATCC TGCTCGCGGC CGGGGTGTTT
ACCGGGATCA TGCAGGGCAG CGGCATGCTG AAGGCGATGG CGCAGGCGGC GGTCGGCTTC
GTGCCGCCGT CGATGGCCGG CCACATTCCT GTCGCGCTCG GCCTCGCGTC GATGCCGCTC
AGCATGCTGT TCGATCCCGA TTCGTTCTAC TTCGGCGTGC TGCCGGTGAT CGCGGAGGTG
GCCGGCCAGT TCGGCGTGCC GGCCGTGCAT GTCGGGCAGG CCGCGTTGCT CGGCCAGATG
ACGACCGGAT TTCCGGTCAG CCCGCTGACG CCCGCGACGT TCCTGGTCGT CGGCCTGTGC
GGGATCGAGC TGGCCGAGCA CCAGAAGTTC ACGTTCCCGC TGCTGTTCGG CGCCTCGATC
GTGATGACGA TCGCGTGCGT CGTGCTGGGC GTTTTTTGA
 
Protein sequence
MLPLLGLGTI VVLLAAILSK RMSPLVALII VPIAASLIGG FGLHTSKFVI DGLKGLAPVV 
GMFVFAILYF GTITDAGTLD PIIDRILRAV GTRPTRIVMG TTLLALLIHL DGSGAVCFLV
TIPAVLPLYD RLKMDRRVLA AAVSMAAGIN FLPWTGPMIR ASASLHLPVS ALFNPLIPVQ
AIGLVFVFGV AYWLGRREEK RLGLSRDDAS IPLPKRELTP DEQALRRPHL FWFNLVLTLV
VLGTMVVMGE KIPPAIMFMV GLCVALMVNY PNVDMQRKRI DAHARAALMM AGILLAAGVF
TGIMQGSGML KAMAQAAVGF VPPSMAGHIP VALGLASMPL SMLFDPDSFY FGVLPVIAEV
AGQFGVPAVH VGQAALLGQM TTGFPVSPLT PATFLVVGLC GIELAEHQKF TFPLLFGASI
VMTIACVVLG VF