| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1269 |
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| Symbol | |
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| ID | 6177576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1402284 |
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| End bp | 1403180 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681027 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001807976 |
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| Protein GI | 172060324 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.151838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ATCTTCGCGA CATTCGCGCG TTCGTCACCG TCGCCCACGC CGGCAACTTC
ACGCGGGCGG CCGCGCGGCT GCACCTGTCG CAGCCGGCGC TGACCGTGCA GATCCGGCGG
CTCGAGGAAA TCGTCGGCGC GCGGCTGTTC GACCGCAACA GCCGCAGCGT CGCGCTCACG
CAGACCGGGC GCGAACTGCT GCCGCTGCTG CAGCGCTCGC TCGACGACAT GGAGCGCGTG
CTGCGCGATG CGCGCGCGCT CGGCGAAGGC GCGAGCGGCA CGGTGCGGCT CGCGTGCCTG
CCGACCTTCG CGTCGAGCCT GCTGCCGGAG CTGATCCAGT CGTTCCGGCA CGACGTGCCG
CGTGCGGGCT TCGAGATTCG CGACGGGGTC GCGAGCCTCG TCACCGCGCT GGTGCGCAAC
GAGGAAGCCG ATCTCGGCCT GACGGGCGGC GATGCGTTCG ATGCGTCGCT GGAGGTGCTG
TACGTGGGCG CCGACCGGCT CGTCGCCGTG TGCCCGAAGG ATCATCCGCT CGCGCGCAAG
CGGCGCGTGC GCACCGCCGA CGTCGCCGCC GTGCCGCTCG TGCTGACCGC GCGCGGCACG
AGTGTGCGCG GCGTGGTCGA TGCCGCACTG GACGCGGCCG GCTGCACGCC GGACATCGCG
TGCGAACCGA CCTACATGAT GACGGCCGTC GCGATGGTGC GCGGCGGGCT CGGCGTGACG
ATCCTGCCGG CGACCGCGCG CGAGGTGCGC GCCGAGCCGG ACCTCGTCGC GAAACCGATC
GACGATCCCG CGTTCGTGCG GCCGATCGCG CTCGTCGTGA AGCGCGGGCG CACGCTGCCG
CGCGTCACAC AGGCGTTCGC CGACGCAATG CTCGCGGCAT TGACAAAGCG CGCGTGA
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| Protein sequence | MDLNLRDIRA FVTVAHAGNF TRAAARLHLS QPALTVQIRR LEEIVGARLF DRNSRSVALT
QTGRELLPLL QRSLDDMERV LRDARALGEG ASGTVRLACL PTFASSLLPE LIQSFRHDVP
RAGFEIRDGV ASLVTALVRN EEADLGLTGG DAFDASLEVL YVGADRLVAV CPKDHPLARK
RRVRTADVAA VPLVLTARGT SVRGVVDAAL DAAGCTPDIA CEPTYMMTAV AMVRGGLGVT
ILPATAREVR AEPDLVAKPI DDPAFVRPIA LVVKRGRTLP RVTQAFADAM LAALTKRA
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