Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1260 |
Symbol | |
ID | 6177537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1394685 |
End bp | 1396055 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681018 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001807967 |
Protein GI | 172060315 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC CGTTGATCAG GCTGTACCTC ATCGTGATCC TGTGCGGCGC CGGATCGATC GCGTTCATCC AGTTCTCGTT CGACCGGATC TTCTACGAAC GCGCGGCGCA GGCGCAGCGA GACTCGCTGA CCACCTACGC GTTCGTGCTG AACGATTATC TCGAACGCCA TCCGGGCGCG CAGCGCACGC TCGCGCTGCG CGAGCTCGCG AAGCACGGCA AGGAAGGATT CGACTTCGTG ACGATGGCTG AAGCCCGCGC CCAATTGAGC GGCGCGCCAC TGCGCGACCT CGACGCCGGC AAGATCGCGA TCGGCTACGA CGGCAAGGAT TACTACATGC CGCTCGCGGA CGGTTCCGTG CTGCATGCGC GCCCGATCCA GCCCTTCGAC CTCGACATCA AGATCTACGC CTACTTGCTG CTTGCGCTCG CCGCGCTGTT CGCGGTCGTG CTGTGGATCT CGTATCACTG GCGCGACCTG CGCAGGCTGC AGGCCGCCGC CCATGCGTTC GGCGCGGGCC GCCTGTCGAC CCGCGTGAAG CTGTCCGGCC GGTCGAACAT CTACGAGCTG TCGCAGCAAT TCAACGACAT GGCCGAGCGG ATCGAGGCGT CGATCAAGCA GCAGCGCGAG ATGATGCACG GGATCTCGCA CGAGCTGAAG ACGCCGCTCG CGCGCCTCGA ATTCGGGCTC GCGCTGCTCG CCGAATCCGA CGAGAGCGGC CGGATGCGGG AACGCCGCGA CGAACTGCGG CGCGACGTGC GCGAACTCGA CGAGCTGGTG ACCGAGCTGC TCACGATCGG GCGGCTCGAA CAAGGCGCCA GCGAGCTCGC GCCGATGGAC GTCGTCGTCG ATGCGCTGAT CGACAGCGTC GCCGGCAACG TCGCGAACGA CCTCGCCGAC CGCGGCATCA CGCTCGGCGT GTCGACCACC GGCGCGCCCG CCACCCACGT GTGCGACCCG AAACTCGTCG CTCGCGCGCT GCTCAACCTG ATCCGCAACA GCGCGCGCTA TGCGGCGCGC ACGGTCCTGC TATCGGCGAC GCACGATGCG TCCGGTGCGC TGGTGCTGAG CGTCGACGAC GACGGCCCCG GCATTCCGGC CGCCGAGCGC GCGCGCGTGT TCGAACCGTT CCAGCGGCTC GATTCGAGCC GCGACCGGCA GACCGGCGGG TTCGGCCTCG GGCTCGCGAT CGTGCGGCGC GTCGCGCTCG TGCACGGCGG CAACGTGCGA CTCGAGGATT CGCCGCTCGG CGGCGCACGC TTCGTGATTT CGCTGCCGGC GCGGACCTTG CCGGACTTCC TGGGCAACGC GCAGGCGAGT CCGGCATGCG GCCGGGCCGA TCTGGCCAGC GTGGCTTCAT TGCTCCGCTG A
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Protein sequence | MLRPLIRLYL IVILCGAGSI AFIQFSFDRI FYERAAQAQR DSLTTYAFVL NDYLERHPGA QRTLALRELA KHGKEGFDFV TMAEARAQLS GAPLRDLDAG KIAIGYDGKD YYMPLADGSV LHARPIQPFD LDIKIYAYLL LALAALFAVV LWISYHWRDL RRLQAAAHAF GAGRLSTRVK LSGRSNIYEL SQQFNDMAER IEASIKQQRE MMHGISHELK TPLARLEFGL ALLAESDESG RMRERRDELR RDVRELDELV TELLTIGRLE QGASELAPMD VVVDALIDSV AGNVANDLAD RGITLGVSTT GAPATHVCDP KLVARALLNL IRNSARYAAR TVLLSATHDA SGALVLSVDD DGPGIPAAER ARVFEPFQRL DSSRDRQTGG FGLGLAIVRR VALVHGGNVR LEDSPLGGAR FVISLPARTL PDFLGNAQAS PACGRADLAS VASLLR
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