Gene BamMC406_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1260 
Symbol 
ID6177537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1394685 
End bp1396055 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content69% 
IMG OID641681018 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001807967 
Protein GI172060315 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC CGTTGATCAG GCTGTACCTC ATCGTGATCC TGTGCGGCGC CGGATCGATC 
GCGTTCATCC AGTTCTCGTT CGACCGGATC TTCTACGAAC GCGCGGCGCA GGCGCAGCGA
GACTCGCTGA CCACCTACGC GTTCGTGCTG AACGATTATC TCGAACGCCA TCCGGGCGCG
CAGCGCACGC TCGCGCTGCG CGAGCTCGCG AAGCACGGCA AGGAAGGATT CGACTTCGTG
ACGATGGCTG AAGCCCGCGC CCAATTGAGC GGCGCGCCAC TGCGCGACCT CGACGCCGGC
AAGATCGCGA TCGGCTACGA CGGCAAGGAT TACTACATGC CGCTCGCGGA CGGTTCCGTG
CTGCATGCGC GCCCGATCCA GCCCTTCGAC CTCGACATCA AGATCTACGC CTACTTGCTG
CTTGCGCTCG CCGCGCTGTT CGCGGTCGTG CTGTGGATCT CGTATCACTG GCGCGACCTG
CGCAGGCTGC AGGCCGCCGC CCATGCGTTC GGCGCGGGCC GCCTGTCGAC CCGCGTGAAG
CTGTCCGGCC GGTCGAACAT CTACGAGCTG TCGCAGCAAT TCAACGACAT GGCCGAGCGG
ATCGAGGCGT CGATCAAGCA GCAGCGCGAG ATGATGCACG GGATCTCGCA CGAGCTGAAG
ACGCCGCTCG CGCGCCTCGA ATTCGGGCTC GCGCTGCTCG CCGAATCCGA CGAGAGCGGC
CGGATGCGGG AACGCCGCGA CGAACTGCGG CGCGACGTGC GCGAACTCGA CGAGCTGGTG
ACCGAGCTGC TCACGATCGG GCGGCTCGAA CAAGGCGCCA GCGAGCTCGC GCCGATGGAC
GTCGTCGTCG ATGCGCTGAT CGACAGCGTC GCCGGCAACG TCGCGAACGA CCTCGCCGAC
CGCGGCATCA CGCTCGGCGT GTCGACCACC GGCGCGCCCG CCACCCACGT GTGCGACCCG
AAACTCGTCG CTCGCGCGCT GCTCAACCTG ATCCGCAACA GCGCGCGCTA TGCGGCGCGC
ACGGTCCTGC TATCGGCGAC GCACGATGCG TCCGGTGCGC TGGTGCTGAG CGTCGACGAC
GACGGCCCCG GCATTCCGGC CGCCGAGCGC GCGCGCGTGT TCGAACCGTT CCAGCGGCTC
GATTCGAGCC GCGACCGGCA GACCGGCGGG TTCGGCCTCG GGCTCGCGAT CGTGCGGCGC
GTCGCGCTCG TGCACGGCGG CAACGTGCGA CTCGAGGATT CGCCGCTCGG CGGCGCACGC
TTCGTGATTT CGCTGCCGGC GCGGACCTTG CCGGACTTCC TGGGCAACGC GCAGGCGAGT
CCGGCATGCG GCCGGGCCGA TCTGGCCAGC GTGGCTTCAT TGCTCCGCTG A
 
Protein sequence
MLRPLIRLYL IVILCGAGSI AFIQFSFDRI FYERAAQAQR DSLTTYAFVL NDYLERHPGA 
QRTLALRELA KHGKEGFDFV TMAEARAQLS GAPLRDLDAG KIAIGYDGKD YYMPLADGSV
LHARPIQPFD LDIKIYAYLL LALAALFAVV LWISYHWRDL RRLQAAAHAF GAGRLSTRVK
LSGRSNIYEL SQQFNDMAER IEASIKQQRE MMHGISHELK TPLARLEFGL ALLAESDESG
RMRERRDELR RDVRELDELV TELLTIGRLE QGASELAPMD VVVDALIDSV AGNVANDLAD
RGITLGVSTT GAPATHVCDP KLVARALLNL IRNSARYAAR TVLLSATHDA SGALVLSVDD
DGPGIPAAER ARVFEPFQRL DSSRDRQTGG FGLGLAIVRR VALVHGGNVR LEDSPLGGAR
FVISLPARTL PDFLGNAQAS PACGRADLAS VASLLR