Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1255 |
Symbol | |
ID | 6177490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1387329 |
End bp | 1388033 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681013 |
Product | GntR domain-containing protein |
Protein accession | YP_001807962 |
Protein GI | 172060310 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA CAGAACCAAA GCGGCTTTAC CAATCCGTGG CCGCGCAAAT CCTCGCATTG ATCCGTCAGG GTGGAATTCC TGCTGGTGGG CGACTGCCGC CCGAGCGCGA GCTCGCGACC ACGCTCGGCG TCTCGCGCCC GTCGTTGCGC GAGGCCTTGA TCGCCCTCGA AATCGGCGGG CAGATCGAGA TACGTCTTGG CTCGGGGGTC TACGTTCGCG ATCCTGGCGA GAGTGACGGG GGCGGCGTGC CCGCGTTGGG AGAGAGCCCA TCGGAGTTGA TGCAGGCGCG CGGTGCCATA GAGGGTTCGG TGGTTGTGCT GGCCACCGCG CGATTCTCGG CAGCTACGCT GGACCGTTTG CGTCGCACGG TGGAGCGCAT GAAGCGGCTC GCCGTCGCGG GCAAATCGCC CGTCGACGCG GACCGGCAGT TTCATATGCT CATTGCGGAG GTGGCAGGCA ACTCCGTGTT GAGCCGCTTC GTGGGCGAGT TGTTCGATAG CCGACACGAC CCGATTGCCG CCGCGATTCG CGGACATTCG GAAAGCCCGG AAACCTGGGC CGCCGCGGTG CGCGAGCACG AGCAGATCCT GAAGGCGTTG CAAGCGGGCG ATCCGATCGC TGCGCAAACC GCGATGCGCG CCCATCTGCA GGCGTCGGAG GAGCGCTGGA TCGGCGGCGC ATTGCAGCAC GGGATTGCGC CCTGA
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Protein sequence | MKQTEPKRLY QSVAAQILAL IRQGGIPAGG RLPPERELAT TLGVSRPSLR EALIALEIGG QIEIRLGSGV YVRDPGESDG GGVPALGESP SELMQARGAI EGSVVVLATA RFSAATLDRL RRTVERMKRL AVAGKSPVDA DRQFHMLIAE VAGNSVLSRF VGELFDSRHD PIAAAIRGHS ESPETWAAAV REHEQILKAL QAGDPIAAQT AMRAHLQASE ERWIGGALQH GIAP
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