| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1252 |
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| Symbol | |
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| ID | 6177481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1383531 |
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| End bp | 1384478 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641681010 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001807959 |
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| Protein GI | 172060307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC TATCCGTACT GGCAGCGGCG GCAATCTTGT GCGCGATGTT CGGCGCGCAT
GCGCAGGCCG CCGGAGGCGA AATTGCGGTG ATCGTGAAGA CGGCCAATTC GAACTACTGG
CAGAACGTGC AGAAAGGCGC CACCGCCGCC ATGGCCAATG CGAAGGGATA CACGATGACG
TTCCAGGGCC CCGCCGCGGA ATCGGCGATC GCCGACGAAG TCAACATGGT CGAGAACGCG
GTGAACCGGC ATGTCGCCGG CATCGTCCTC GCGCCGTCGG ATCCGGACGC ACTCGTGCCG
GCCATGAAGA AAGCATGGGA AGCGCATATT CCGGTGGTGT TGATCGACTC GACCGTATCC
GATGCCGGCA AGCAGTACTA CCAGTCGTTC CTGTCGACCG ACAACGCGAA AGCCGGCGAA
CTCTGTGCGA AAGCGATGAT CGACCGGGTC GGGCAGACCG GCAAGGTCGC GGTCATGTCG
TACGTGCCGG GCGCCGGTTC GGAAGTCGGC CGCGTCGGCG GATTCCGCAA GTACATCGCC
GCGCATTCGA AGCTGCAGGT GGTGGGGCCG TTCTATTCGC AGTCGCAGAT GGCGAATGCG
CTGAACCAGA CGACCGACGT CCTGTCGGCG AACCCGGACC TCAAGGGCAT CTTCGGCGCC
AATGAACCGA CCGCCGTCGG GATGGGACGC GCGCTGCAGC AGTCGGGCAA AGGCGGCAAG
GTCGTGGCGA TCGGCTTCGA CGGCAATCAG GACCTCCAGG GATTCGTTCG AGACGGCACG
ATTCAGGCCA TCGCCGTTCA GAGCTCGTAC CAGATGGGCT ACAAGGGCAT CGAGACCCTC
GTCAACGTGA TCGGGCGCAA GCCTGTTTCC AAGCAGGTGG ATACGGGCGT GCTGATGGTC
GAAAAGCAGA ATCTCGACTC GCCCGCAGCG AAGAACGTCC TGTACTGA
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| Protein sequence | MKKLSVLAAA AILCAMFGAH AQAAGGEIAV IVKTANSNYW QNVQKGATAA MANAKGYTMT
FQGPAAESAI ADEVNMVENA VNRHVAGIVL APSDPDALVP AMKKAWEAHI PVVLIDSTVS
DAGKQYYQSF LSTDNAKAGE LCAKAMIDRV GQTGKVAVMS YVPGAGSEVG RVGGFRKYIA
AHSKLQVVGP FYSQSQMANA LNQTTDVLSA NPDLKGIFGA NEPTAVGMGR ALQQSGKGGK
VVAIGFDGNQ DLQGFVRDGT IQAIAVQSSY QMGYKGIETL VNVIGRKPVS KQVDTGVLMV
EKQNLDSPAA KNVLY
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