Gene BamMC406_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1250 
Symbol 
ID6176782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1381577 
End bp1382449 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content64% 
IMG OID641681008 
Productamidohydrolase 2 
Protein accessionYP_001807957 
Protein GI172060305 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATTCC GGATCGACGC TCATCAGCAC TTCTGGCAGA TGGCCAGTCG CGACGGTTAT 
TGGCCCCCGC AAACGCTGGA TGCCATCTAT CGGGACTTCG GTCCGCAGGA TCTCGAACCG
CTGCTTGCGC AGTCCGGTGT GCAGCGGACT GTTGTTGTCC AGTCGCTACC GACTCAAGAA
GACACGCGCT ATCTGCTCGA CGTTGCATCC CGGACGAGCT TCGTGTCGGC CGTCGTCGGA
TGGGTGGACC TCAAATCCGC GGGCGCGCCG GCCGATATCG CGTCGCTCGC CCGTGATCCG
AAATTCCGTG GCATTCGTCC GATGCTGCAG GATCTTGCCG ATGACGACTG GATCGACGAT
CCAATTCTCG AGCCGGCCAT CGACGCCATG CTCGCGAACG ATCTCGCTTT CGATGCACTG
GTCACGCCGC GCCATCTGCC CGCGCTGCTC GCATTCGCGC GCCGCTACCC TCGCCTGCGC
ATCGTGATCG ACCACGCCGC CAAGCCACCC ATCGCATCGG GCCGAAGTGA AGCGTGGCAC
GCCGCGATGA GCGAACTCGC CGCGCATCCG AACGTGCACT GCAAGCTCTC CGGAATGTGG
ACGGAAGCCG GCCCGCATCC CGATCTCCTG CGCGTCGAGC CGTACGTGCG CGCGGTCTGC
GACTGGTTCG GCGCGTCCCG GCTGATCTGG GGCAGCGACT GGCCCGTCTC GCGCCTTGCC
GGTCATTTTG GTGACTACGG GGCCTGGCTC GCATGGTGCG AACAATGCTG CGACCGCTTC
ATCGGGCCCG ACGCACGCGC GCGCGTTTTC GGCGGCAATG CATGCCACTT CTACAGAATC
GATCGGCCGT CCGGCGATCA ACACGCTCAA TAA
 
Protein sequence
MTFRIDAHQH FWQMASRDGY WPPQTLDAIY RDFGPQDLEP LLAQSGVQRT VVVQSLPTQE 
DTRYLLDVAS RTSFVSAVVG WVDLKSAGAP ADIASLARDP KFRGIRPMLQ DLADDDWIDD
PILEPAIDAM LANDLAFDAL VTPRHLPALL AFARRYPRLR IVIDHAAKPP IASGRSEAWH
AAMSELAAHP NVHCKLSGMW TEAGPHPDLL RVEPYVRAVC DWFGASRLIW GSDWPVSRLA
GHFGDYGAWL AWCEQCCDRF IGPDARARVF GGNACHFYRI DRPSGDQHAQ