Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1248 |
Symbol | |
ID | 6176825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1379371 |
End bp | 1380531 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681006 |
Product | mannitol dehydrogenase domain-containing protein |
Protein accession | YP_001807955 |
Protein GI | 172060303 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.347252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAC CGATTCTTCA GTTTGGCACC AGCCGGTTTC TCCAGGCCCA CGTCGCCCTG TTCGTATCGC AGGCGCTGGA GCGCGGCGAC GCGATCGGCG GAATCCGCAT GGTGCAGACC ACCGACAACC CGGCAAGCCA TGCGCGCATC GCCGCTTTGG CCCAGTCGGG CAGTTATCCG GTGAAGATCC GCGGCAGGGA ACACGGCGCG ATCGTGGATA CGGTCGTCCA CTGCCGCGCC GTGCGCGCTG CGTGGATCGC CGATCGCGAC TGGGGGATGA TCCGGCATGC GGTGACGCAT GACGTCCGCG TCATTGTGTC GAATACCGGC GATGCAGGCT ATCGTCTCGA CGAGCGCGAT TCGCCGGCGC TGCTCGCGCG GGAGAGTCAT GTCCCGCGCA GCTTCCCCGC CAAGCTGCTC ACGCTGCTGC ATGCACGATG GCGCGCACGG CCCGGTGCGG GCGTGTCGAT CTTTCCCTGC GAACTCGTCG CGCGCAACGG CGACACGCTG CGCGCGCTGG TCATCGGCCT CGCTGAACAA TGGGCGCTGC CCGCGCCCTT CGTCACGTAT CTGTCGCAAC GATGCATCTG GGTCAACTCG CTGGTCGACC GGATCGTGTC CGAACCGATC GAACCGGTGG GCGCCGTGGC CGAGCCCTAC GCGCTCTGGG CCATCGAACG ACATCCGGGC ATGGAATTGC CGTGCACGCA TGAACATATC GTCGTGACCG ACGACCTGCT CAGCCACGAG CGGCTCAAGC TGTTCTTCCT GAACGTCGGG CATACGTGGC TCGCCGACCA ATGGCTCGTG CAGCGCCGCA GCAGCGCGCA GACCGTATTC GACGCGATGA ACGACACGAC GCTGCGCGAG GGCATCGAGG GCGTCTGGGG CGAGGAAGTC TTGCCCGTGT TCGATGCGCT CGGGATGCGC GTTCGCGCAG AACAGTACGT TGCAAGCGTG CGCGAACGGT TTCTCAATCC GTATCTCGAC CATCACATCG CGGACATTGC CGGCAACCAT GTCGAAAAGG TCCGGCGGCG AATTCTGCCG CTGATCGAAC TGGGCGATTC GCTCGGGGTC GCGCCTGATC AGACTCGGCT ACGCGATACG CTCGCGCGGC ATGGCGTGAC ACCCTCAACC AAAGAGGCAA ATGCATCATG A
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Protein sequence | MSEPILQFGT SRFLQAHVAL FVSQALERGD AIGGIRMVQT TDNPASHARI AALAQSGSYP VKIRGREHGA IVDTVVHCRA VRAAWIADRD WGMIRHAVTH DVRVIVSNTG DAGYRLDERD SPALLARESH VPRSFPAKLL TLLHARWRAR PGAGVSIFPC ELVARNGDTL RALVIGLAEQ WALPAPFVTY LSQRCIWVNS LVDRIVSEPI EPVGAVAEPY ALWAIERHPG MELPCTHEHI VVTDDLLSHE RLKLFFLNVG HTWLADQWLV QRRSSAQTVF DAMNDTTLRE GIEGVWGEEV LPVFDALGMR VRAEQYVASV RERFLNPYLD HHIADIAGNH VEKVRRRILP LIELGDSLGV APDQTRLRDT LARHGVTPST KEANAS
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