| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1234 |
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| Symbol | |
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| ID | 6177056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1361223 |
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| End bp | 1366214 |
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| Gene Length | 4992 bp |
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| Protein Length | 1663 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680992 |
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| Product | histidine kinase dimerisation/phosphoacceptor |
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| Protein accession | YP_001807941 |
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| Protein GI | 172060289 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.745042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGG GCTACGACGT AACGACATTG AGCGACGATG GTCAGTTCGT GCTGTCGCGC
CTGACGAGCC CGGGGGCGTC GGACAGCTGG CTGACGGTCA CGTTGTCGGC ATCGCAGCCG
CAGCCGGAAA GCCACGAGCG TCTGGAGCAC GCGTATCAGT TGCGCGGCAT GCTCGACGGC
GCGCATGTCA CGCGGCCTCA CGCGCTGCTG CGCGACGAGC GCAACGCGAC GCTCGTGCTC
GAGGATCCGG GCGGCAGATC GCTTCGCGTG GCGCAAGCGG GGCCGTTGCC GATAGGCCTG
TTCCTTACCC TTGCCGTCAA CCTCGCGTCG GCGCTGCGCT CCCTGCACAG CCGCGGCCTC
ACGCACAACG ACATCCGGCC GGGCAACATT CTCATCGACG ATGCGACCCA GGCCATCGCG
CTGACGGGTC TCGGCCTTGT CTCCCGTGCG CCGCGCGAGC GTCCGCGCGA CGGCCCGCCC
GCGATCGCCG TCGAAGCGCT TCCCTATCTG TCGCCCGAAC GCACGGGGCT GATGAACCGC
TGGTCTGACT CGCGTGCCGA TCTGTACTCG CTCGGCGTCG TGTTGTACGA AATGATGACG
GGGAAGTTGC CGTATCGGGC CGCTTCGGCG GCGGAATGGC TGCATTGCCA TACGGCGCAA
GTGCCCATTC CGGTGGCCGA ATGCATCGAC GGCGTGCCCG CGCAACTGAG CGCGATCGTT
GCACGCCTGC TGTCGAAGGA CGCCGCGCAG CGCTATCAGA CCGCAGCAGG GCTCGAACAC
GATCTGCGGC GCTGTCTCGA CGCATGGCGC ACATCGGGCA ACGTCGAGGC GTTCGCGTCG
GGTGCCTCCG ATGCGCCCGA TCAGCTGCAA CGGCCGTTTC GTCTTTATGG ACGCCAGAAG
CAGCAGCACA AGCTCGAAGC CGCGCTGGAG CACGTCGTGC AGAGCGGCGA GACTGGCGTG
GCGTTGGTGT CGGGCTATTC GGGCATCGGC AAATCGACGC TCGTGAGCGG GTTGCGCATG
ACGCCTGCTG CGTCACGCGG ATGGTTCGCA TCGGGCAAGT TCGAACGCTA CAAGCGCGAC
ATTCCGTACG CCACGCTCGC GCAGGCGTTC CAGACGCTGA TCCGCGAGCT GATCGACGAC
GGCATGCGCA CACACGCGGA CCTGCGCCAG CGCCTGCACG ATGCGCTCGG CGCGAACGGC
CAGCTGATCG TCGATCTGAT TCCCGAGCTG GAGGCGATCG TCGGGCCGCA GCCGCCCGTG
CCCGAACTCG CGCCGCAGGA AGCACGCATG CGCTTTCTCG CCGTGTTCAC GCGTTTCATC
GCTGCGTTCC CGTGCGACGG CCAGCCGCTC GTGCTGTTTC TCGACGACCT GCAATGGAGC
GACGCGGGCA CGTTCAGCGT ACTCGAACAG CTGTGCGGGC CGGGCGCGCG CAACGTGTTC
GTGGTCGGCG CGTATCGCGA CAACGAAGTG GGCGTCGCGC ATCCGCTCAG ACGCACAGTC
GATCTGATCC GGCAGACGGG CACGCGCGTC GACGAAATCA TGCTGACGCC GCTGCAACCT
GACGACGTCG CGCATCTGAT CGGCGACGCC CTCACGACCA CGCGGCCCGA ACTGGAGGGC
CTGAGCCGTC TCGTGTTCGA GCGCACGGGC GGCAATCCGT TCTACGTCGT GCAGTTTCTG
CAATTTCTCG CCGACGAGCG TTTCCTCGCG TTCGATCTCG ACTGCCGCAT CTGGACGTGG
GACAACGAAA GGCTGCGCGA AGCGCGTTTC GCGGACACCA TCGTCGATTT GATGGTCGGC
AAGATCGAAC GGTTGCCGCG CGGCACGCAG GCGTTGCTCG AACAGTTCGC GTGTCTGGGC
GGCCGCGCGA CGTCGCCGCT GCTCGCGCGC ATCAGCGGCC TGGACGAGGC GCAGGTGGCC
ACGACCCTCG CCGATGGCGT CGAGGCCGGC CTGCTGTACC GCAGCCGCGA AGGCTATGCG
TTCGTGCACG ACCGCGTGCA CGAGGCGGCG TATGAACTGA TCCCGCCGCA GTTGCGTGAG
CAGGCGCATC TGCGGATCGG CCGGATTCTC GCGGCGCAGC CGGCTACGGA CGAAGCGCGC
AGCATCTTCG AGATCGTCAA CCAGTACAAC CGCGTCATTC CTCTACTCGA CGATCCCGCC
GAGCGCGCGC GGGTGGTGGA CTTCAATCTC GAGGCGGGGC AGCGCGCACG CGCGTCGGCG
GCGTACGGCT CGGCGCTCGC GTACCTCTCG ACGGGCAGCG AACTGCTCGG CGAAGCAGGC
TGGGACGCGG ACTATGCCCG CAAATTCCAG CTGGAATGCC AGCTCGCCGA ATGCGAGTTT
CTGACGGGCG CAATGGAAAG CAGCGAACGA CGGCTGTCGA TGCTCGACAC GCGCGCGCGC
ACGCTGGCCG ACCGCGCGGC CGTCACGTTT CTGCGCGTCA CGCTCTACAC GGCGCTCGAT
CGGATGAACC TCGCGGTGCA GACGTGCCTC GACTATCTGC GGCACGTCGG CATCGGCTGG
GATCCGCATC CGGGCCGCGA CGCGGCGCGC GCAGAATACG ACACGCTGTT GCAGGGCATC
GGCGGCGCGC CGATCGAAAC GCTGGTCGAT CTGCCCTTGC TCGACGACGC GGGACTCGCC
GCGACGATGA ACGTGCTGAC GGCCGTGTTG CCGCCCGCGT TCTTCAGCGA TGAAAACCTC
GTGTGCCTCG TGCTGTGCCG GATGGCGAAC CTGAGCCTGC TGTACGGCAA CAGCGATGCG
TCGTCGCTCG GCTATGCGTA TCTCGGCATG GTCGCGGGTC CGCTGTTCGA CGACTACGAC
GCGGGCTACC GCTTCGGCCA GCTCGGCCTC GCGCTCGTGG ACAAGCGCGG GCTGGACCGT
TTCAAGGCGC GTGTCTACAT GTGCTTCGCG TATCACGTGA CGCCGTGGAC GCGGCCGATC
CGTACCGGTT TGCCCTTGCT GCGCCGCGCG TTCGAAGTCG CGAGCGAAGG CGGGGACCTG
ACCTACATCG GTTTCAGCAG CTGCTGTACG GTCACGACGC TGATCGCCGC GGGCGAGCCG
CTCGCGGAAG TCGAGCAGGA AGCGCAGCGT CGCCTGCAGA TCGTTCAGGC CGCGAAGTTC
GGCCTCATCG TCGACATCAT CACCGCGCAA CTCGCGCTGA TTCAATCGTT GCGCGGCAAC
CTCGACGCGC ATGACACGCT TCCCGATCGC TTCGATGACG CGGCGTTCGA GCAGCGCCTC
GACGGCGATC CGAGTCTCGC GATCGCGGCG TGCTGGTACT GGATCCGCAA GCTGCAGGCG
CGCTATCTGG CCGGCGATAT CGAAGGCGCG ATGCATGCGG ACAGCAAGGC GTCGCCGTTG
CTGTGGACAT CGTCGGGTCA TTTCGAAATC GCCGAGTATC AGTTCTTTGC GGGGCTCACG
CGCGCAAGCT GGCACGAAGG CGCGCCGGAA ATCGCCAAGG CCGGGAATCT GGACAAGCTC
GCCGCGCATC AGCGGCAGCT GGCGCTGTGG GCCGAGCACT GCCCGAGCAA CTTCAGCAGC
CGCGCGGCGT TGATGAGCGG CGAAATCGCT CGCATCGCGG GCCGCGAGTT CGAAGCGATG
AACAGCTACG AAGAAGCGAT CCGTCTCGCG CGCAAGCATG ATTTCCCGCA CGACGAAGCG
CTCGCGCACG AGATTGCCGC GAAGTTCTAT CTGGCGCGCG GCTTTACGAC GACGGCCGCC
GCGTATGTCC GCAACGCGCG CCGCGCGTGG TTGCGCTGGG GCGCGATCGC GCGCGTGAAG
TCGCTCGATC GGCGTTATGC CGAGCTGCTG CGCGAGCCCG TCGAGCAGGC GCCGGCGCCC
GGCGTCGTCG CCGAACAACT CGACGTCGAT ACTGTGGTGA AGGCGTCGCA GGCGATCTCC
GGCGAACTGG TTCCCGAGCG TCTGATGCGC ACGCTGATGA CGATCATGCT CGAACACGCG
GGCGCGCGGC GCGCGCTGCT CGTGCTGCCG CGCGCCGACG CGTTGTGGAT CGAAGCAACG
GCGGTGGCGG GGCGCGAAGG ACCGGAAGTG CACTTCGACA GCAGACCGGT GAATGCGCAG
GATCTGTCGA GTGCCGTGCT GCTCGAAAGC ATTCGCACGC AACGCGCGTT GCTGATCGAC
GATGCGATCT TCGACCAGAC CTGGTCGGCC GACGAGCATT TCGCCGCGCA GCATTCGCGT
TCGGTGCTGT CGCTGCCGCT CGTCAAGCAG TCAAAGCTGA TCGGCGTGCT GTATCTGGAG
AACGAACTCG CGCCCGGCGT GTTCACGCCC GCGCGTCTCG CCGTGCTCAG GCTGCTTGCG
TCACAGGCGG CCGTGTCGCT CGAAAATGCG TCGCTCGAAG AGAAACATGC GTTGCTTGCC
GAGAAAGATG CGCTGCTGCA TGAAGTGCAT CATCGCGTGA AGAACAATCT GCAATTGATC
AGCAGCCTGC TGAATCTTCA GGCGGAGCGC GTGACGAACA AGGCCGTTGC CGAACTGTTC
GCCGACAGCC GCAACCGCGT ACGCTCGATG GCGATGGTGC ACGAGAACCT CTATCGCGCG
GGCAACTTCG CGCGCATCGC GATGACGGCG CACGTGAAGA CCTTATGCGG TCATCTGGCG
CGCGTCTACG ACATGGGGCG ACTAGGCGTC GACCTGCAGA TCGACGTCGA CGACATTCAA
CTCGACATGA ACCGCGCGGT GTCGTGCGGT CTCGTCATCA ACGAACTGGT GTCGAATGCG
CTCAAGCATG CGTTTCCGGA TCAGCGCGGC GGCGTGCTCA AGGTCGAACT CAAGGCGATC
GACGACCAGC GCTGCGCGTT GATCGTCGCC GACGACGGCG TCGGCCTCGC GCCCGGCTTT
TCGTTCGAAC GCGATGAAAC GCTCGGCTTG CGCCTCGTTC ACGACCTCGT GCTGCAATTG
CGCGGCCGCA TCGATATCGC GCAGCAGCAC GGCACCACTT TCACCATTCA ATTCAATGCA
GCAGAACGTT GA
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| Protein sequence | MLTGYDVTTL SDDGQFVLSR LTSPGASDSW LTVTLSASQP QPESHERLEH AYQLRGMLDG
AHVTRPHALL RDERNATLVL EDPGGRSLRV AQAGPLPIGL FLTLAVNLAS ALRSLHSRGL
THNDIRPGNI LIDDATQAIA LTGLGLVSRA PRERPRDGPP AIAVEALPYL SPERTGLMNR
WSDSRADLYS LGVVLYEMMT GKLPYRAASA AEWLHCHTAQ VPIPVAECID GVPAQLSAIV
ARLLSKDAAQ RYQTAAGLEH DLRRCLDAWR TSGNVEAFAS GASDAPDQLQ RPFRLYGRQK
QQHKLEAALE HVVQSGETGV ALVSGYSGIG KSTLVSGLRM TPAASRGWFA SGKFERYKRD
IPYATLAQAF QTLIRELIDD GMRTHADLRQ RLHDALGANG QLIVDLIPEL EAIVGPQPPV
PELAPQEARM RFLAVFTRFI AAFPCDGQPL VLFLDDLQWS DAGTFSVLEQ LCGPGARNVF
VVGAYRDNEV GVAHPLRRTV DLIRQTGTRV DEIMLTPLQP DDVAHLIGDA LTTTRPELEG
LSRLVFERTG GNPFYVVQFL QFLADERFLA FDLDCRIWTW DNERLREARF ADTIVDLMVG
KIERLPRGTQ ALLEQFACLG GRATSPLLAR ISGLDEAQVA TTLADGVEAG LLYRSREGYA
FVHDRVHEAA YELIPPQLRE QAHLRIGRIL AAQPATDEAR SIFEIVNQYN RVIPLLDDPA
ERARVVDFNL EAGQRARASA AYGSALAYLS TGSELLGEAG WDADYARKFQ LECQLAECEF
LTGAMESSER RLSMLDTRAR TLADRAAVTF LRVTLYTALD RMNLAVQTCL DYLRHVGIGW
DPHPGRDAAR AEYDTLLQGI GGAPIETLVD LPLLDDAGLA ATMNVLTAVL PPAFFSDENL
VCLVLCRMAN LSLLYGNSDA SSLGYAYLGM VAGPLFDDYD AGYRFGQLGL ALVDKRGLDR
FKARVYMCFA YHVTPWTRPI RTGLPLLRRA FEVASEGGDL TYIGFSSCCT VTTLIAAGEP
LAEVEQEAQR RLQIVQAAKF GLIVDIITAQ LALIQSLRGN LDAHDTLPDR FDDAAFEQRL
DGDPSLAIAA CWYWIRKLQA RYLAGDIEGA MHADSKASPL LWTSSGHFEI AEYQFFAGLT
RASWHEGAPE IAKAGNLDKL AAHQRQLALW AEHCPSNFSS RAALMSGEIA RIAGREFEAM
NSYEEAIRLA RKHDFPHDEA LAHEIAAKFY LARGFTTTAA AYVRNARRAW LRWGAIARVK
SLDRRYAELL REPVEQAPAP GVVAEQLDVD TVVKASQAIS GELVPERLMR TLMTIMLEHA
GARRALLVLP RADALWIEAT AVAGREGPEV HFDSRPVNAQ DLSSAVLLES IRTQRALLID
DAIFDQTWSA DEHFAAQHSR SVLSLPLVKQ SKLIGVLYLE NELAPGVFTP ARLAVLRLLA
SQAAVSLENA SLEEKHALLA EKDALLHEVH HRVKNNLQLI SSLLNLQAER VTNKAVAELF
ADSRNRVRSM AMVHENLYRA GNFARIAMTA HVKTLCGHLA RVYDMGRLGV DLQIDVDDIQ
LDMNRAVSCG LVINELVSNA LKHAFPDQRG GVLKVELKAI DDQRCALIVA DDGVGLAPGF
SFERDETLGL RLVHDLVLQL RGRIDIAQQH GTTFTIQFNA AER
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