| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1224 |
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| Symbol | |
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| ID | 6177407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1351078 |
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| End bp | 1352448 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680981 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001807931 |
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| Protein GI | 172060279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CCGCATTACC GCACGCAGTC GGCACCGGGT CGGCCGCCGT CTCGCACCGG
CGCGTCCTCG CGCTCGCGTT CCCGATCGTC CTGGCGAACC TGACCCAGCC GATCCTCGGC
GCGGTCGACA CGGCCGTCGC CGGCCACCTC GACGGCGCGC AGTATCTCGG CGGCGTCGCG
CTCGGCGGAC TGTTCTTCAA TTTCGTGTTC TGGGGCTTCG GCTTCCTGCG CATGGGCACG
ACCGGCCTCG TCGCGCAGGC GCACGGCGCC GGCGACGCCG CCGGCATCCG CCTGAACGTG
CTGCGCGCGC TGATCGTCGC GTTCGCCCTC GGCGCCGCGG TGCTCGCGCT GCAGGTGCCG
CTGCTGTCGT TCGCGCTGTC CGCGCTGGGC GGCAGCGACG CGGTTCGCGC AACCGCGCTG
GCCTACGGCC ACGCGCGGAT CTGGAGCGCG CCGTTCGCGC TCGCGAACTA CGTCGTGCTC
GGCTACCTGC TCGGCGTGCA GCGCGTGCGG CTCGCGCTCA TCGCACAGGT CTTCATCAAT
GCGGTGAACA TCGGTGCCGT GCTGTTGTAT GTGTACGGCT TCGGCTGGGG CATTGCCGGG
ATCGGTGCGG CGACCGCGAC CGCCGACGCA TGCGGCTTCG CGCTCGGCGC CTGGATGCTG
TGGCAGCTGC GGCCGCGCGG CCTCGCGCCC ATCGCCGCGC GTGCGCTGGC GGACCGTGCG
GCGCTCAAGC GGCTGATCGT ACTCAATCGC GACATCTTCC TGCGCACGAT GTGCCTGCTC
GGCGCGTTCG GGTGGTTCGC GCATCTCGGC GCGAAACAGG GCGATGCGAC GCTCGCGGCC
AACGCTTTGC TGCTGAATTT TCAGACGTTC ATGGCGTACG GGCTCGACGG TTTCGCGCAT
GCGGCCGAGG CGCTCGTCGG CGCCGCGGCC GGCGCGCGCG ACCGCGCCGC ATTCCGGCAG
GCCGTGCGCG TCACGTTGCT GTGGTCCGCG CTCGGTGCGC TGCTGTTCGC GCTCGTCTAC
TGGGCGGCCG GCGGATGGAT CGTCGCGCAG CTGACCGACC AGGCCGAGAT CCGCGCGGTC
GCGCTGCAAT ACCTGCCGTG GGCGGCGATC TCGCCGATCG TGTCCGTGTG GGGATTCCTG
CTCGACGGCG TGTTCATCGG CGCGACGCAG ACGCAATCGC TGATGCGCGC GATGGTCGCG
TCGTTCGCGA TCTTCATCGC GGCGACACTG ACCATCGTCG GCCCGTTCGG CAATCACGGG
CTGTGGTTCG CGCTGCTGTT GTTCATGGTC GCGCGCGGCG CGACGCTCGC ACGCTATCTG
CCGGCGCTCG TGCGGCGAAT CGGCGCCGAC GCGCCCGCGG CCGGCGCCTG A
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| Protein sequence | MSDSALPHAV GTGSAAVSHR RVLALAFPIV LANLTQPILG AVDTAVAGHL DGAQYLGGVA
LGGLFFNFVF WGFGFLRMGT TGLVAQAHGA GDAAGIRLNV LRALIVAFAL GAAVLALQVP
LLSFALSALG GSDAVRATAL AYGHARIWSA PFALANYVVL GYLLGVQRVR LALIAQVFIN
AVNIGAVLLY VYGFGWGIAG IGAATATADA CGFALGAWML WQLRPRGLAP IAARALADRA
ALKRLIVLNR DIFLRTMCLL GAFGWFAHLG AKQGDATLAA NALLLNFQTF MAYGLDGFAH
AAEALVGAAA GARDRAAFRQ AVRVTLLWSA LGALLFALVY WAAGGWIVAQ LTDQAEIRAV
ALQYLPWAAI SPIVSVWGFL LDGVFIGATQ TQSLMRAMVA SFAIFIAATL TIVGPFGNHG
LWFALLLFMV ARGATLARYL PALVRRIGAD APAAGA
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