| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1216 |
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| Symbol | |
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| ID | 6177652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1343734 |
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| End bp | 1346304 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680972 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001807923 |
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| Protein GI | 172060271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC AGGCGCTGTT TCCAGGCATG CGCGGATGGG TCGTTGCCGT GTCGGTCTGG
GTATTCGGCA CCGCGTGCGT GATGGCGCAA ACCACGGATG GCGAGTTGAT TCGTCCGGTT
CGCGTCGTCA GCACGGCGGG TAACGTGGCC AACGCCGACG CGTTGACCAC GGGCGGCTCG
ACGACATTGA CAATGGCGCC GGGCGGCCCG TCTCCGACCA TCACGCTGGA CTACGGGCGA
GTGGTCGGCG GTCTGCCGGT ATTCGCGGTC AGCGCGGTGT CCGGACGTCC CGCGCTGCAG
GCGGTCTATG CGGAGGCCCA ACAGTACCTC GGCGCGAATG GAGACAGCTC CTATCCGGAC
GGCGCCGAGT TCAACGTGTC CTTCGTCGGC AATGGCGGGG CGGTGAGCCA GTCGCGCATG
AACACGTATC GGCCGAGCGG CCCAGGGCTG ATCGTGAGTC GCCTGGTTCA GGGTGGAGAG
CGCTTTCAGG TCATTCGGCT GACCCAGCCG GGCAGCGTGA CGCTGTCTCG CGTGGGTATC
CGTCCGCTCG TCCCCACACC CCAAAGGCGC GCCGGCTATT TTACGTCCAG CGATCCGGCG
TTGAATGAGA TCTGGGATCT GGGTGCGCGC ACGGTCGAGC TGGGTACGGT TCCGGCACGC
AGCTTGCCGC CTACCTGGAC CGTTACGCCT CAAGGCCTGA TCGTCAGGGA CAGCACATTC
TCGATGTACC AGGCCGGGAC GAAGTGGTCC GGCTACACCG CGGAGTTCGA CGTTCAGGTG
CTCGAGAACG AGGCAGGCTG GATGGTCGGC GCAAGTCCGA GCGGCGGATT CCGGCTGGTG
CTTGCCGCGA GCGACGATGC AATCGGTACC CCGAATACGC TTCGGCTCAC GCATCCTTTC
GTGGCGGGCA CGCTGGCACA GGTCGCGTTG CCGTTCGAAC TCAAGCGCGG CACGTGGCAT
CACGTGAAGA CCGTAGCAGG AAGCGCCGTG CAGGTGTACG TGGACGACCG GCTCGTGCTC
GACGCACCGA TACCTTCACC GGGCTCATTC GGCTTTGCGG GATACGACGG CAGCGCAGGG
CTGTTCCGCA ACCTGAAGAT TACCGGGGGC GGCGGTACGT TGCTTGATGC GAAGCTGACG
GATCCGGCCG TCCTCGACGC CTTCGCCGCG GGAACGAACC GCTTTGCCGC GATTCTCGAT
GGCGCGAAGC GTGACCGGTA CGTGTGGAGC GGCGATTTGG CCGTGAGCGC GCCTGCGATC
TACTACTCGA CCGGCGCCAC CGACGCCGTT GCCGGCTCCC TGGGACTGGC TGCCGCCTAC
CAGCGTTCGA ACGGCATGTT CCCCGGCGAT CTTCCCCCGC AACTTGCGGC CGGCGTGGCG
AGCGCGGATG CAATGCCCGA TGCGTACTAT TATTCGCTAT CCTATTCGAT CTATTTCCTG
ACGACCCTGC ACGACTATTA CCTGTACACC GGCGATCTCG ACTTCGTGCG CAAGCATTGG
GCCGCCGTTC GCCGTTCGTT CGATTACTTG CGCGGACTGA CCAATGCGAA TGGCCTGATC
GTGACGGATG CGTCGAATTC GGCGGACTGG CACCCGCACG ATGCGTCGAA ATTGACCGGC
ACTGTGACGG AGTTCAACAC GCTGTATTAC GGTGCGCTCC GTGGCGGGGC GAAGCTCGCT
GCAGCCGTGG GCGACCTTGG CGCCCAGCGC GACTACGATG CGCAGGCAGC TCGCGTGCGC
GGGGCGGTCA ACGCGACGCT CTACGATTCC GGTAGCGGTC TGTATGTCAT CAGCGACCAG
ATTCGCGGGC CGGTCGCCCA GGACGCGAAT GCGCTGGCGG TGCTTTACGG TATTGCGCCG
CGGGACAAGT GGACGACGAT TCTCGGCAAG ATGGGTACCG CGCTTTCCAC TGCCAACGGG
CCGCTCGCAT TTTCGCCAGA TTACCGGACG CCGCCGCTTC TCAGCCAGCT CATCAGCCCG
TTCGTTTCCA GTTTCGACGT TGCCGCGCGG TTCGAAGCCG GGGATGCGGG GGGCGCGCTG
TCAGTCATTC GCACCGTATG GGGGCATATG CGGGCGGGCA GTCCTTACTA CAGCGGTGCG
ACCTGGGAGG CGATTGCGCC CGACGGCACG CCGGTTCCGC CCGCCGCCGC CGGCAATACC
TACGCAAGCC TCGCGCACGG CTGGTCGTCG GGGCCGACGT CGGCATTGTC GAAATACGTG
CTCGGTGTGC GGCCACTCTC GGCGGGGTAC CGGTCGTGGC TCGTCGAATC CCAGCCGGGC
GATTTGCGCT GGGCGCGGGG GAGAGTACCG ACGCCTTACG GCGGGATCGA AGTCGAGTGG
CGGACTTCGG GAGTCGACTT CGACCTGACG GTCGTCGTGC CGCCTGGCAC GACCGGGGCA
GTTGGCGTTC CAGTTGGAGA GGGGCGCCGC ACGCTGGTCG TCAACGGGCG CACCGTGCAA
GCCGACGCGT CGTTTGGCGG CCCGCAGGGT GTCAATCGTC GGAGCGGCTA CGCATATCTC
GGCAATTTAC CGGCTGGACG CTACCGAATT TCGGTGGGCA AACCTGGCTG A
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| Protein sequence | MNRQALFPGM RGWVVAVSVW VFGTACVMAQ TTDGELIRPV RVVSTAGNVA NADALTTGGS
TTLTMAPGGP SPTITLDYGR VVGGLPVFAV SAVSGRPALQ AVYAEAQQYL GANGDSSYPD
GAEFNVSFVG NGGAVSQSRM NTYRPSGPGL IVSRLVQGGE RFQVIRLTQP GSVTLSRVGI
RPLVPTPQRR AGYFTSSDPA LNEIWDLGAR TVELGTVPAR SLPPTWTVTP QGLIVRDSTF
SMYQAGTKWS GYTAEFDVQV LENEAGWMVG ASPSGGFRLV LAASDDAIGT PNTLRLTHPF
VAGTLAQVAL PFELKRGTWH HVKTVAGSAV QVYVDDRLVL DAPIPSPGSF GFAGYDGSAG
LFRNLKITGG GGTLLDAKLT DPAVLDAFAA GTNRFAAILD GAKRDRYVWS GDLAVSAPAI
YYSTGATDAV AGSLGLAAAY QRSNGMFPGD LPPQLAAGVA SADAMPDAYY YSLSYSIYFL
TTLHDYYLYT GDLDFVRKHW AAVRRSFDYL RGLTNANGLI VTDASNSADW HPHDASKLTG
TVTEFNTLYY GALRGGAKLA AAVGDLGAQR DYDAQAARVR GAVNATLYDS GSGLYVISDQ
IRGPVAQDAN ALAVLYGIAP RDKWTTILGK MGTALSTANG PLAFSPDYRT PPLLSQLISP
FVSSFDVAAR FEAGDAGGAL SVIRTVWGHM RAGSPYYSGA TWEAIAPDGT PVPPAAAGNT
YASLAHGWSS GPTSALSKYV LGVRPLSAGY RSWLVESQPG DLRWARGRVP TPYGGIEVEW
RTSGVDFDLT VVVPPGTTGA VGVPVGEGRR TLVVNGRTVQ ADASFGGPQG VNRRSGYAYL
GNLPAGRYRI SVGKPG
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