| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1215 |
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| Symbol | |
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| ID | 6177672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1342596 |
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| End bp | 1343603 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641680971 |
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| Product | rhamnose ABC transporter, periplasmic rhamnose-binding protein |
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| Protein accession | YP_001807922 |
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| Protein GI | 172060270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.953291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA CACTGCGCAT TGCGACGACC GTCGCAGTTT GCGGCCTGTT GTTCGGAATC
GGGAGTGTCG CCGGTGCAAC CGGCGTGAAG GACGGCCTGA AGATCGCGTT CGTGCCGAAG
CAGATCAACA ACCCGTACGA GGTCATTGCC GACGAAGGCG GGATGGCGGC CATCAAGGAG
TTCAAGGGTG ACGGAAAGGT GGTCGGCCCT TCGGACGCCG GCGCGTCGTC GCAGGTGCAG
TATGTCAATA CGCTGATCAC GCAGCGACAG AATGCGATCG TGATCGCGGC AAACGATCCC
AACGCGGTCG TGCCGTATCT GAAGCGCGCG ATGTCGCAGG GCATCAAGGT CGTCACGTTC
GATTCCGACA CGGCGGCGGA CGGCCGCAAT ATTTTCGTCA ACCAGGCCAA TGCCGAGAGC
ATCGGCCGCG GCCAGATCCA GCTCGTCGCG AAGCTGATGG GCGGGGAGGG CGAGTTCGCG
ATTCTGTCGG CAACGCCGAA TGCCACCAAC CAGAACACCT GGATCAAGTG GATGCAGGAG
GAATTGAAGA AGCCGGAGTA CGCGAAGATG AAGCTCGTCA AGATCGCATA CGGCAATGAC
GACGACCAGA AATCGTTTGT CGAAACCCAG GGCCTGCTGC AGGCCTACCC GAACCTGAAG
GCGATCGTGT CGCCGACCTC GGTCGGTATC GCCGCCGCTG CACGCTATAT CTCGACGTCG
TCGAGCAAGG GCAAGGTGGC GGTGACGGGG CTCGGCACGC CGAACCAGAT GCGCGCTTTC
GTGAAGAACG GCACGGTCAA GGCATTCCAG CTCTGGGATC CGGGCCAACT CGGCTACCTT
GCCGCCTATG CGGCCGCCAA TCTCGCATCG GGTGCGATCT CGGGCAAGGA AGGCGAGAGT
TTCGAGGCCG GCAAGCTCGG CAAGCGCACG ATCGGCAAGA GCGGAGAAGT GATCCTCGGG
CCGCCCACGA CGTTCGATGC GTCCAACATC GACCAATTCA ACTTCTGA
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| Protein sequence | MIKTLRIATT VAVCGLLFGI GSVAGATGVK DGLKIAFVPK QINNPYEVIA DEGGMAAIKE
FKGDGKVVGP SDAGASSQVQ YVNTLITQRQ NAIVIAANDP NAVVPYLKRA MSQGIKVVTF
DSDTAADGRN IFVNQANAES IGRGQIQLVA KLMGGEGEFA ILSATPNATN QNTWIKWMQE
ELKKPEYAKM KLVKIAYGND DDQKSFVETQ GLLQAYPNLK AIVSPTSVGI AAAARYISTS
SSKGKVAVTG LGTPNQMRAF VKNGTVKAFQ LWDPGQLGYL AAYAAANLAS GAISGKEGES
FEAGKLGKRT IGKSGEVILG PPTTFDASNI DQFNF
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