| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1209 |
|---|
| Symbol | |
|---|
| ID | 6177813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1336567 |
|---|
| End bp | 1337511 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641680965 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001807916 |
|---|
| Protein GI | 172060264 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCGC ACGACGTCAC CGTCTCACTC GTCAACCGCC TGAAGTTCAA GCATCTCGGG
CTCCTCGTGG CGCTCGACGA TACGCGCAAC CTCCATCAGG CCGCGGACGA AATCAACGTC
GCGCAGCCGA GCGCGAGCCG CATGCTGGGC GATATCGAGG ACGCATTCGG TTTCCGGCTG
TTCGAGCGCA ACGCCCGCGG CATGTCTCCT ACCGCGCTGG GAGAGGTCGT GCTCACCTAC
GCGCGCCGCG CACTGTCCGA CCTGACCCGC TTCGCCGAAG ATCTGGATGC AAAGCGCCGC
GGCGGGCACG GCCAGCTGAC GGTCGGCGCG ATCATGGGCG CCGCACCCGA CGTACTGGCA
CTCGCCGTCG CCGCGCTGAA GACCGAGCGC CCGCTCCTCA ACATGCGGAT CCTCGGCGAG
ACCAGCGATC AGATCGTTCA GCTCCTCTAT CGACGCGACG TCGAACTTGC ACTCGGCCGA
CTGACCGCAT CGCTCCAGCA CAACGACTTC AGCTTCGAGC CGCTCGCACG CGAGACGCTC
GTGCTCGTCG TGCGTGCCCG ACACCCGCTC GCCGACGTGT CCCGCGTGTC GCTCGACGAG
CTCGTCGCAT GGCCCTGGAT CGCGCAGCCG GTCACGAGCC CGGCGCGCGC GATCCTGGAA
GAGGAGCTTG CTCGCGCGAA TCTGTCGACG CCCGCCAACG TCACGGAATG CGGTTCGATC
TTCGCGACGC TGCAGCTCGT CGGCACGTAC GATGCCGTCG CGATGCTTCC CGAATCCGTC
GTCCGCGACC ACGTGCGTGC GAAGCTGCTC GTCGCATTGC CGATCGAGAT CGGCAAGAGC
CTGCCGGGCT ATGGGATCCT CACACGCAAG GAGGAACCGC TGTCCGAGCC CGCGGTTCAC
TTCATCGCCC TGCTTCGCCG CTTCTCGCAG CCGGTCGCGA ACTGA
|
|---|
| Protein sequence | MSPHDVTVSL VNRLKFKHLG LLVALDDTRN LHQAADEINV AQPSASRMLG DIEDAFGFRL
FERNARGMSP TALGEVVLTY ARRALSDLTR FAEDLDAKRR GGHGQLTVGA IMGAAPDVLA
LAVAALKTER PLLNMRILGE TSDQIVQLLY RRDVELALGR LTASLQHNDF SFEPLARETL
VLVVRARHPL ADVSRVSLDE LVAWPWIAQP VTSPARAILE EELARANLST PANVTECGSI
FATLQLVGTY DAVAMLPESV VRDHVRAKLL VALPIEIGKS LPGYGILTRK EEPLSEPAVH
FIALLRRFSQ PVAN
|
|---|
| |