Gene BamMC406_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1203 
Symbol 
ID6177980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp1330453 
End bp1331064 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID641680959 
ProductTetR family transcriptional regulator 
Protein accessionYP_001807910 
Protein GI172060258 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA GAACTCAGCG CCGGGTTGCC GCGACCCGCC TGGCGATCCT GCAAGCCGCC 
GAGACTTTGC TGACGGAGGG GGGGCTAGAC GCGGTCACGC CTGAAGCGGT TGCGACCCGG 
GCGGATGTCG CAGTGCAGAC GCTCTATAAC CGTGTAGGTG GCCGTTCCGC GTTGCTCATT 
GCCGTGGCGG AGCGCGCGTT GGAAGAAAAC CGCGAGTACA TGGACGCGGC CTATGCATCC 
GATGGCGATG TGGAGACGAA ATTACGTTGT GTGGCAGCTG CTTACGCGCG GTTTGCCAAG 
GAGCGCCCGC ACCAATTCCG TATCCTTGTC GAGCCACCGA ATGAGCCGGA GGCGCTCGCG 
CGCATCGCTG CCCTGATCAG ACAGCAAAAC GCCAAATTGG CCGCATTGAT CAGCCGAGGT 
ATCGATGAAG GGTGGGTGCA TGCCGAGGTC GAGCCGGAAC ACGCCTCGAC GGCGCTGTGG 
GCAATGATGA ATGGCGTTAT CAGTCTGATG TGGCGCCCGG ATAGCCTTCG ACTGGATGTC 
GATCACATCG ACGATCTACT GCGTACTGCG ATCTCTTTGT TGACCGGCGG TATCAAGAGG 
CGGGGCGATT GA
 
Protein sequence
MESRTQRRVA ATRLAILQAA ETLLTEGGLD AVTPEAVATR ADVAVQTLYN RVGGRSALLI 
AVAERALEEN REYMDAAYAS DGDVETKLRC VAAAYARFAK ERPHQFRILV EPPNEPEALA 
RIAALIRQQN AKLAALISRG IDEGWVHAEV EPEHASTALW AMMNGVISLM WRPDSLRLDV 
DHIDDLLRTA ISLLTGGIKR RGD